Protein–RNA interactions for Protein: Q2M3C7

SPHKAP, A-kinase anchor protein SPHKAP, humanhuman

Predictions only

Length 1,700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHKAPQ2M3C7 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SPHKAPQ2M3C7 RN7SL23P-201ENST00000484055 275 ntBASIC20.6■□□□□ 0.89
SPHKAPQ2M3C7 AC093909.3-201ENST00000504783 336 ntBASIC20.6■□□□□ 0.89
SPHKAPQ2M3C7 RNA5SP406-201ENST00000516106 112 ntBASIC20.6■□□□□ 0.89
SPHKAPQ2M3C7 C2orf69P1-201ENST00000563532 1093 ntBASIC20.6■□□□□ 0.89
SPHKAPQ2M3C7 CCDC113-206ENST00000616795 891 ntTSL 5 BASIC20.6■□□□□ 0.89
SPHKAPQ2M3C7 LINC00244-201ENST00000625073 613 ntBASIC20.6■□□□□ 0.89
SPHKAPQ2M3C7 CASP16P-204ENST00000635032 809 ntBASIC20.6■□□□□ 0.89
SPHKAPQ2M3C7 LINC00431-202ENST00000636375 159 ntBASIC20.6■□□□□ 0.89
SPHKAPQ2M3C7 AC114296.1-204ENST00000637197 1173 ntAPPRIS P5 TSL 5 BASIC20.6■□□□□ 0.89
SPHKAPQ2M3C7 ODCP-201ENST00000459650 1639 ntBASIC20.6■□□□□ 0.89
SPHKAPQ2M3C7 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SPHKAPQ2M3C7 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
SPHKAPQ2M3C7 RHOG-201ENST00000351018 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SPHKAPQ2M3C7 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SPHKAPQ2M3C7 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC20.6■□□□□ 0.89
SPHKAPQ2M3C7 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SPHKAPQ2M3C7 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC20.59■□□□□ 0.89
SPHKAPQ2M3C7 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC20.59■□□□□ 0.89
SPHKAPQ2M3C7 MIR3936HG-204ENST00000621103 1793 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SPHKAPQ2M3C7 CRYM-202ENST00000543948 1400 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
SPHKAPQ2M3C7 DUT-208ENST00000559540 1441 ntTSL 2 BASIC20.59■□□□□ 0.89
SPHKAPQ2M3C7 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SPHKAPQ2M3C7 MYB-242ENST00000618728 3545 ntTSL 5 BASIC20.59■□□□□ 0.89
SPHKAPQ2M3C7 DSCAM-AS1-202ENST00000427451 1640 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SPHKAPQ2M3C7 LINC02021-201ENST00000504808 1608 ntTSL 3 BASIC20.59■□□□□ 0.89
SPHKAPQ2M3C7 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC20.59■□□□□ 0.89
SPHKAPQ2M3C7 RGR-203ENST00000372092 868 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SPHKAPQ2M3C7 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
SPHKAPQ2M3C7 Metazoa_SRP.100-201ENST00000447610 282 ntBASIC20.59■□□□□ 0.89
SPHKAPQ2M3C7 FAHD2CP-203ENST00000467292 965 ntTSL 2 BASIC20.59■□□□□ 0.89
SPHKAPQ2M3C7 AC093826.1-201ENST00000508655 993 ntBASIC20.59■□□□□ 0.89
SPHKAPQ2M3C7 AC084752.1-201ENST00000509766 622 ntBASIC20.59■□□□□ 0.89
SPHKAPQ2M3C7 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SPHKAPQ2M3C7 SNHG15-205ENST00000580458 710 ntTSL 2 BASIC20.59■□□□□ 0.89
SPHKAPQ2M3C7 AC073592.2-201ENST00000623062 780 ntBASIC20.59■□□□□ 0.89
SPHKAPQ2M3C7 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
SPHKAPQ2M3C7 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC20.59■□□□□ 0.89
SPHKAPQ2M3C7 SHMT1P1-201ENST00000419974 1312 ntBASIC20.59■□□□□ 0.89
SPHKAPQ2M3C7 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
SPHKAPQ2M3C7 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
SPHKAPQ2M3C7 DNMT3L-204ENST00000628202 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
SPHKAPQ2M3C7 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC20.59■□□□□ 0.89
SPHKAPQ2M3C7 TMEM182-201ENST00000409173 3198 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SPHKAPQ2M3C7 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SPHKAPQ2M3C7 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC20.59■□□□□ 0.89
SPHKAPQ2M3C7 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
SPHKAPQ2M3C7 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
SPHKAPQ2M3C7 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SPHKAPQ2M3C7 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SPHKAPQ2M3C7 MMP7-201ENST00000260227 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SPHKAPQ2M3C7 AC103592.1-201ENST00000394513 664 ntBASIC20.58■□□□□ 0.89
SPHKAPQ2M3C7 ACTG1P19-201ENST00000418987 1116 ntBASIC20.58■□□□□ 0.89
SPHKAPQ2M3C7 RN7SL767P-201ENST00000493013 295 ntBASIC20.58■□□□□ 0.89
SPHKAPQ2M3C7 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC20.58■□□□□ 0.89
SPHKAPQ2M3C7 RPS23-207ENST00000511844 530 ntTSL 2 BASIC20.58■□□□□ 0.89
SPHKAPQ2M3C7 AP003398.1-201ENST00000531124 318 ntBASIC20.58■□□□□ 0.89
SPHKAPQ2M3C7 AC013553.1-201ENST00000560906 267 ntBASIC20.58■□□□□ 0.89
SPHKAPQ2M3C7 USB1-205ENST00000561743 1135 ntTSL 3 BASIC20.58■□□□□ 0.89
SPHKAPQ2M3C7 SNORD3B-1-201ENST00000577988 758 ntBASIC20.58■□□□□ 0.89
SPHKAPQ2M3C7 OCEL1-206ENST00000597836 1044 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
SPHKAPQ2M3C7 AC006158.1-201ENST00000610661 249 ntBASIC20.58■□□□□ 0.89
SPHKAPQ2M3C7 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SPHKAPQ2M3C7 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
SPHKAPQ2M3C7 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SPHKAPQ2M3C7 BIN3-202ENST00000399977 1340 ntTSL 2 BASIC20.58■□□□□ 0.89
SPHKAPQ2M3C7 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.89
SPHKAPQ2M3C7 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
SPHKAPQ2M3C7 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SPHKAPQ2M3C7 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20.58■□□□□ 0.89
SPHKAPQ2M3C7 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC20.58■□□□□ 0.89
SPHKAPQ2M3C7 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SPHKAPQ2M3C7 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SPHKAPQ2M3C7 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC20.58■□□□□ 0.89
SPHKAPQ2M3C7 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC20.58■□□□□ 0.88
SPHKAPQ2M3C7 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC20.58■□□□□ 0.88
SPHKAPQ2M3C7 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
SPHKAPQ2M3C7 MED11-201ENST00000293777 833 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SPHKAPQ2M3C7 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SPHKAPQ2M3C7 HTATIP2-202ENST00000421577 886 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
SPHKAPQ2M3C7 AP001057.1-201ENST00000437557 799 ntTSL 5 BASIC20.58■□□□□ 0.88
SPHKAPQ2M3C7 TEX36-AS1-202ENST00000446081 749 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
SPHKAPQ2M3C7 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC20.58■□□□□ 0.88
SPHKAPQ2M3C7 TMEM123-208ENST00000532161 743 ntAPPRIS ALT2 TSL 3 BASIC20.58■□□□□ 0.88
SPHKAPQ2M3C7 MT2A-202ENST00000561491 581 ntTSL 2 BASIC20.58■□□□□ 0.88
SPHKAPQ2M3C7 AC145285.5-201ENST00000562217 361 ntBASIC20.58■□□□□ 0.88
SPHKAPQ2M3C7 AC011444.1-201ENST00000587836 639 ntTSL 3 BASIC20.58■□□□□ 0.88
SPHKAPQ2M3C7 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SPHKAPQ2M3C7 ALDOA-204ENST00000412304 1603 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
SPHKAPQ2M3C7 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SPHKAPQ2M3C7 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
SPHKAPQ2M3C7 LIPE-AS1-204ENST00000594624 1448 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SPHKAPQ2M3C7 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SPHKAPQ2M3C7 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SPHKAPQ2M3C7 SPATA8-201ENST00000328504 1083 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
SPHKAPQ2M3C7 FAM3B-201ENST00000357985 1088 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
SPHKAPQ2M3C7 S100A3-202ENST00000368713 856 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SPHKAPQ2M3C7 OR52M2P-201ENST00000414298 959 ntBASIC20.57■□□□□ 0.88
SPHKAPQ2M3C7 LINC01022-201ENST00000415652 394 ntTSL 3 BASIC20.57■□□□□ 0.88
SPHKAPQ2M3C7 LINC02557-201ENST00000432249 477 ntTSL 3 BASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms