Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
HMGCS1Q01581 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
HMGCS1Q01581 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HMGCS1Q01581 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC14.29□□□□□ -0.12
HMGCS1Q01581 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
HMGCS1Q01581 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
HMGCS1Q01581 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
HMGCS1Q01581 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
HMGCS1Q01581 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
HMGCS1Q01581 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
HMGCS1Q01581 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
HMGCS1Q01581 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HMGCS1Q01581 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HMGCS1Q01581 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
HMGCS1Q01581 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
HMGCS1Q01581 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HMGCS1Q01581 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
HMGCS1Q01581 RN7SKP230-201ENST00000365642 335 ntBASIC14.29□□□□□ -0.12
HMGCS1Q01581 APOA1-205ENST00000375329 927 ntTSL 2 BASIC14.29□□□□□ -0.12
HMGCS1Q01581 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC14.29□□□□□ -0.12
HMGCS1Q01581 COQ6-210ENST00000554920 649 ntTSL 3 BASIC14.29□□□□□ -0.12
HMGCS1Q01581 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC14.29□□□□□ -0.12
HMGCS1Q01581 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
HMGCS1Q01581 MRPL37P1-201ENST00000592451 1337 ntBASIC14.29□□□□□ -0.12
HMGCS1Q01581 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HMGCS1Q01581 CICP16-201ENST00000502609 2813 ntBASIC14.29□□□□□ -0.12
HMGCS1Q01581 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
HMGCS1Q01581 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
HMGCS1Q01581 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
HMGCS1Q01581 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HMGCS1Q01581 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
HMGCS1Q01581 AC011840.2-201ENST00000563063 1520 ntBASIC14.29□□□□□ -0.12
HMGCS1Q01581 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
HMGCS1Q01581 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC14.29□□□□□ -0.12
HMGCS1Q01581 AC015688.4-201ENST00000580780 1647 ntBASIC14.29□□□□□ -0.12
HMGCS1Q01581 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
HMGCS1Q01581 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HMGCS1Q01581 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
HMGCS1Q01581 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HMGCS1Q01581 AC090505.1-201ENST00000430515 1834 ntBASIC14.29□□□□□ -0.12
HMGCS1Q01581 INE2-201ENST00000630399 1874 ntBASIC14.29□□□□□ -0.12
HMGCS1Q01581 OS9-207ENST00000439210 1946 ntTSL 2 BASIC14.29□□□□□ -0.12
HMGCS1Q01581 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HMGCS1Q01581 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC14.29□□□□□ -0.12
HMGCS1Q01581 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
HMGCS1Q01581 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HMGCS1Q01581 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
HMGCS1Q01581 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
HMGCS1Q01581 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
HMGCS1Q01581 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC14.28□□□□□ -0.12
HMGCS1Q01581 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
HMGCS1Q01581 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC14.28□□□□□ -0.12
HMGCS1Q01581 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HMGCS1Q01581 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HMGCS1Q01581 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HMGCS1Q01581 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HMGCS1Q01581 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HMGCS1Q01581 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HMGCS1Q01581 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
HMGCS1Q01581 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
HMGCS1Q01581 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HMGCS1Q01581 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC14.28□□□□□ -0.12
HMGCS1Q01581 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HMGCS1Q01581 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HMGCS1Q01581 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HMGCS1Q01581 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
HMGCS1Q01581 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HMGCS1Q01581 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
HMGCS1Q01581 DGCR5-201ENST00000399539 862 ntBASIC14.28□□□□□ -0.12
HMGCS1Q01581 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC14.28□□□□□ -0.12
HMGCS1Q01581 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HMGCS1Q01581 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC14.28□□□□□ -0.12
HMGCS1Q01581 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC14.28□□□□□ -0.12
HMGCS1Q01581 SERF2-209ENST00000409646 559 ntTSL 4 BASIC14.28□□□□□ -0.12
HMGCS1Q01581 CLUHP2-201ENST00000426660 1303 ntBASIC14.28□□□□□ -0.12
HMGCS1Q01581 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC14.28□□□□□ -0.12
HMGCS1Q01581 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
HMGCS1Q01581 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC14.28□□□□□ -0.12
HMGCS1Q01581 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC14.28□□□□□ -0.12
HMGCS1Q01581 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC14.28□□□□□ -0.12
HMGCS1Q01581 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
HMGCS1Q01581 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC14.28□□□□□ -0.12
HMGCS1Q01581 TP53TG3HP-202ENST00000569755 579 ntBASIC14.28□□□□□ -0.12
HMGCS1Q01581 AC009486.1-201ENST00000569860 813 ntBASIC14.28□□□□□ -0.12
HMGCS1Q01581 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
HMGCS1Q01581 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC14.28□□□□□ -0.12
HMGCS1Q01581 RN7SL832P-201ENST00000607781 1756 ntBASIC14.28□□□□□ -0.12
HMGCS1Q01581 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC14.28□□□□□ -0.12
HMGCS1Q01581 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
HMGCS1Q01581 AC016397.2-201ENST00000624848 1985 ntBASIC14.28□□□□□ -0.12
HMGCS1Q01581 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
HMGCS1Q01581 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HMGCS1Q01581 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
HMGCS1Q01581 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
HMGCS1Q01581 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HMGCS1Q01581 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC14.27□□□□□ -0.12
HMGCS1Q01581 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
HMGCS1Q01581 MST1P2-201ENST00000457982 2291 ntBASIC14.27□□□□□ -0.12
HMGCS1Q01581 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
HMGCS1Q01581 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms