Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
AP1S1P61966 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
AP1S1P61966 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC14.84□□□□□ -0.03
AP1S1P61966 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
AP1S1P61966 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
AP1S1P61966 R3HDM2P2-201ENST00000401880 2116 ntBASIC14.84□□□□□ -0.03
AP1S1P61966 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
AP1S1P61966 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
AP1S1P61966 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
AP1S1P61966 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
AP1S1P61966 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC14.84□□□□□ -0.03
AP1S1P61966 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
AP1S1P61966 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
AP1S1P61966 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
AP1S1P61966 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
AP1S1P61966 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
AP1S1P61966 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
AP1S1P61966 AC097376.2-205ENST00000610159 5334 ntBASIC14.84□□□□□ -0.03
AP1S1P61966 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
AP1S1P61966 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
AP1S1P61966 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC14.84□□□□□ -0.03
AP1S1P61966 FAM86MP-201ENST00000340703 885 ntBASIC14.84□□□□□ -0.03
AP1S1P61966 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
AP1S1P61966 KRTAP10-13P-201ENST00000412914 571 ntBASIC14.84□□□□□ -0.03
AP1S1P61966 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC14.84□□□□□ -0.03
AP1S1P61966 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
AP1S1P61966 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC14.84□□□□□ -0.03
AP1S1P61966 AC108725.1-201ENST00000495472 409 ntBASIC14.84□□□□□ -0.03
AP1S1P61966 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC14.84□□□□□ -0.03
AP1S1P61966 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC14.84□□□□□ -0.03
AP1S1P61966 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
AP1S1P61966 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC14.84□□□□□ -0.03
AP1S1P61966 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC14.84□□□□□ -0.03
AP1S1P61966 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC14.84□□□□□ -0.03
AP1S1P61966 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC14.84□□□□□ -0.03
AP1S1P61966 AL008638.5-201ENST00000623814 1298 ntBASIC14.84□□□□□ -0.03
AP1S1P61966 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
AP1S1P61966 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC14.84□□□□□ -0.03
AP1S1P61966 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
AP1S1P61966 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
AP1S1P61966 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
AP1S1P61966 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC14.84□□□□□ -0.03
AP1S1P61966 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
AP1S1P61966 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC14.84□□□□□ -0.03
AP1S1P61966 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
AP1S1P61966 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
AP1S1P61966 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
AP1S1P61966 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
AP1S1P61966 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
AP1S1P61966 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
AP1S1P61966 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
AP1S1P61966 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
AP1S1P61966 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC14.83□□□□□ -0.03
AP1S1P61966 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
AP1S1P61966 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC14.83□□□□□ -0.03
AP1S1P61966 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC14.83□□□□□ -0.03
AP1S1P61966 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
AP1S1P61966 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC14.83□□□□□ -0.03
AP1S1P61966 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
AP1S1P61966 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.03
AP1S1P61966 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
AP1S1P61966 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
AP1S1P61966 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC14.83□□□□□ -0.04
AP1S1P61966 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
AP1S1P61966 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
AP1S1P61966 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
AP1S1P61966 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
AP1S1P61966 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
AP1S1P61966 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
AP1S1P61966 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
AP1S1P61966 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
AP1S1P61966 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
AP1S1P61966 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
AP1S1P61966 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
AP1S1P61966 SMS-201ENST00000379404 1174 ntTSL 3 BASIC14.83□□□□□ -0.04
AP1S1P61966 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
AP1S1P61966 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC14.83□□□□□ -0.04
AP1S1P61966 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC14.83□□□□□ -0.04
AP1S1P61966 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
AP1S1P61966 AL645933.1-201ENST00000440087 609 ntBASIC14.83□□□□□ -0.04
AP1S1P61966 AC104306.2-201ENST00000451877 341 ntBASIC14.83□□□□□ -0.04
AP1S1P61966 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC14.83□□□□□ -0.04
AP1S1P61966 AC027237.1-201ENST00000560942 655 ntBASIC14.83□□□□□ -0.04
AP1S1P61966 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
AP1S1P61966 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC14.83□□□□□ -0.04
AP1S1P61966 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC14.83□□□□□ -0.04
AP1S1P61966 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
AP1S1P61966 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
AP1S1P61966 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
AP1S1P61966 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
AP1S1P61966 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC14.83□□□□□ -0.04
AP1S1P61966 AL008718.2-201ENST00000609206 1313 ntBASIC14.83□□□□□ -0.04
AP1S1P61966 GSN-203ENST00000373808 2664 ntTSL 2 BASIC14.83□□□□□ -0.04
AP1S1P61966 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC14.83□□□□□ -0.04
AP1S1P61966 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
AP1S1P61966 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC14.83□□□□□ -0.04
AP1S1P61966 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.04
AP1S1P61966 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
AP1S1P61966 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC14.83□□□□□ -0.04
AP1S1P61966 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms