Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 MPZL3-203ENST00000525386 973 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CLDN6P56747 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
CLDN6P56747 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC14.16□□□□□ -0.14
CLDN6P56747 PRMT5-AS1-206ENST00000599580 847 ntTSL 5 BASIC14.16□□□□□ -0.14
CLDN6P56747 AC107464.3-201ENST00000609172 737 ntBASIC14.16□□□□□ -0.14
CLDN6P56747 LINC01783-202ENST00000614408 828 ntBASIC14.16□□□□□ -0.14
CLDN6P56747 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC14.16□□□□□ -0.14
CLDN6P56747 BX284668.2-205ENST00000619677 828 ntBASIC14.16□□□□□ -0.14
CLDN6P56747 FAM168A-204ENST00000450446 1364 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CLDN6P56747 AC003102.2-201ENST00000589195 1469 ntBASIC14.16□□□□□ -0.14
CLDN6P56747 AL161772.1-201ENST00000610494 4412 ntBASIC14.16□□□□□ -0.14
CLDN6P56747 WARS-232ENST00000556645 2508 ntTSL 5 BASIC14.16□□□□□ -0.14
CLDN6P56747 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC14.16□□□□□ -0.14
CLDN6P56747 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CLDN6P56747 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CLDN6P56747 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
CLDN6P56747 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CLDN6P56747 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC14.16□□□□□ -0.14
CLDN6P56747 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC14.16□□□□□ -0.14
CLDN6P56747 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CLDN6P56747 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC14.15□□□□□ -0.14
CLDN6P56747 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC14.15□□□□□ -0.14
CLDN6P56747 MANEAL-201ENST00000329006 1930 ntTSL 2 BASIC14.15□□□□□ -0.14
CLDN6P56747 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLDN6P56747 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLDN6P56747 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
CLDN6P56747 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
CLDN6P56747 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLDN6P56747 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLDN6P56747 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC14.15□□□□□ -0.14
CLDN6P56747 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC14.15□□□□□ -0.14
CLDN6P56747 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLDN6P56747 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLDN6P56747 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
CLDN6P56747 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC14.15□□□□□ -0.14
CLDN6P56747 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLDN6P56747 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLDN6P56747 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
CLDN6P56747 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLDN6P56747 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
CLDN6P56747 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC14.15□□□□□ -0.14
CLDN6P56747 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC14.15□□□□□ -0.14
CLDN6P56747 LINC00028-201ENST00000435497 587 ntTSL 2 BASIC14.15□□□□□ -0.14
CLDN6P56747 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC14.15□□□□□ -0.14
CLDN6P56747 RPL18AP3-201ENST00000462885 528 ntBASIC14.15□□□□□ -0.14
CLDN6P56747 SNCB-203ENST00000506696 552 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
CLDN6P56747 AC026410.1-201ENST00000507366 1101 ntBASIC14.15□□□□□ -0.14
CLDN6P56747 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
CLDN6P56747 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC14.15□□□□□ -0.14
CLDN6P56747 ORAOV1-209ENST00000538554 1000 ntTSL 2 BASIC14.15□□□□□ -0.14
CLDN6P56747 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC14.15□□□□□ -0.14
CLDN6P56747 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC14.15□□□□□ -0.14
CLDN6P56747 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC14.15□□□□□ -0.14
CLDN6P56747 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC14.15□□□□□ -0.14
CLDN6P56747 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLDN6P56747 MIR6858-201ENST00000620733 67 ntBASIC14.15□□□□□ -0.14
CLDN6P56747 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLDN6P56747 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC14.15□□□□□ -0.14
CLDN6P56747 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLDN6P56747 BID-213ENST00000615414 2236 ntTSL 5 BASIC14.15□□□□□ -0.14
CLDN6P56747 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC14.15□□□□□ -0.14
CLDN6P56747 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLDN6P56747 AC090616.6-203ENST00000579186 1945 ntBASIC14.15□□□□□ -0.14
CLDN6P56747 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLDN6P56747 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CLDN6P56747 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CLDN6P56747 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLDN6P56747 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
CLDN6P56747 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CLDN6P56747 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
CLDN6P56747 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
CLDN6P56747 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
CLDN6P56747 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CLDN6P56747 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC14.14□□□□□ -0.15
CLDN6P56747 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC14.14□□□□□ -0.15
CLDN6P56747 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CLDN6P56747 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC14.14□□□□□ -0.15
CLDN6P56747 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
CLDN6P56747 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CLDN6P56747 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CLDN6P56747 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
CLDN6P56747 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
CLDN6P56747 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CLDN6P56747 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CLDN6P56747 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC14.14□□□□□ -0.15
CLDN6P56747 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CLDN6P56747 IGLJ3-201ENST00000390324 176 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
CLDN6P56747 AC234644.1-201ENST00000406065 370 ntBASIC14.14□□□□□ -0.15
CLDN6P56747 MIR1227-201ENST00000408484 88 ntBASIC14.14□□□□□ -0.15
CLDN6P56747 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC14.14□□□□□ -0.15
CLDN6P56747 AL592076.1-201ENST00000424448 303 ntBASIC14.14□□□□□ -0.15
CLDN6P56747 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC14.14□□□□□ -0.15
CLDN6P56747 AC018463.1-201ENST00000456674 917 ntBASIC14.14□□□□□ -0.15
CLDN6P56747 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC14.14□□□□□ -0.15
CLDN6P56747 RPP40-203ENST00000464646 1042 ntTSL 5 BASIC14.14□□□□□ -0.15
CLDN6P56747 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC14.14□□□□□ -0.15
CLDN6P56747 AC108199.1-201ENST00000504249 508 ntTSL 3 BASIC14.14□□□□□ -0.15
CLDN6P56747 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC14.14□□□□□ -0.15
CLDN6P56747 CCNC-217ENST00000523985 958 ntTSL 2 BASIC14.14□□□□□ -0.15
CLDN6P56747 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms