Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
GFRA1P56159 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
GFRA1P56159 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
GFRA1P56159 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
GFRA1P56159 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC13.2□□□□□ -0.3
GFRA1P56159 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
GFRA1P56159 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
GFRA1P56159 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
GFRA1P56159 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
GFRA1P56159 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
GFRA1P56159 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
GFRA1P56159 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
GFRA1P56159 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC13.2□□□□□ -0.3
GFRA1P56159 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
GFRA1P56159 CYP4F23P-201ENST00000593402 1579 ntBASIC13.2□□□□□ -0.3
GFRA1P56159 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
GFRA1P56159 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC13.2□□□□□ -0.3
GFRA1P56159 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
GFRA1P56159 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC13.19□□□□□ -0.3
GFRA1P56159 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
GFRA1P56159 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC13.19□□□□□ -0.3
GFRA1P56159 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
GFRA1P56159 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
GFRA1P56159 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
GFRA1P56159 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
GFRA1P56159 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
GFRA1P56159 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
GFRA1P56159 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC13.19□□□□□ -0.3
GFRA1P56159 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
GFRA1P56159 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
GFRA1P56159 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
GFRA1P56159 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
GFRA1P56159 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC13.19□□□□□ -0.3
GFRA1P56159 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
GFRA1P56159 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
GFRA1P56159 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
GFRA1P56159 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
GFRA1P56159 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC13.19□□□□□ -0.3
GFRA1P56159 AC011742.3-201ENST00000439053 820 ntBASIC13.19□□□□□ -0.3
GFRA1P56159 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC13.19□□□□□ -0.3
GFRA1P56159 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC13.19□□□□□ -0.3
GFRA1P56159 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC13.19□□□□□ -0.3
GFRA1P56159 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC13.19□□□□□ -0.3
GFRA1P56159 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC13.19□□□□□ -0.3
GFRA1P56159 ACTG1P17-201ENST00000558391 1119 ntBASIC13.19□□□□□ -0.3
GFRA1P56159 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
GFRA1P56159 AC026740.1-201ENST00000607068 791 ntBASIC13.19□□□□□ -0.3
GFRA1P56159 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC13.19□□□□□ -0.3
GFRA1P56159 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
GFRA1P56159 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
GFRA1P56159 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC13.19□□□□□ -0.3
GFRA1P56159 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
GFRA1P56159 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
GFRA1P56159 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC13.19□□□□□ -0.3
GFRA1P56159 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC13.19□□□□□ -0.3
GFRA1P56159 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC13.19□□□□□ -0.3
GFRA1P56159 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC13.19□□□□□ -0.3
GFRA1P56159 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
GFRA1P56159 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
GFRA1P56159 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
GFRA1P56159 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
GFRA1P56159 AGGF1P1-201ENST00000509500 2073 ntBASIC13.19□□□□□ -0.3
GFRA1P56159 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
GFRA1P56159 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
GFRA1P56159 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
GFRA1P56159 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
GFRA1P56159 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC13.18□□□□□ -0.3
GFRA1P56159 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
GFRA1P56159 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC13.18□□□□□ -0.3
GFRA1P56159 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
GFRA1P56159 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
GFRA1P56159 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC13.18□□□□□ -0.3
GFRA1P56159 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
GFRA1P56159 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
GFRA1P56159 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
GFRA1P56159 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC13.18□□□□□ -0.3
GFRA1P56159 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
GFRA1P56159 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
GFRA1P56159 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC13.18□□□□□ -0.3
GFRA1P56159 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC13.18□□□□□ -0.3
GFRA1P56159 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
GFRA1P56159 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
GFRA1P56159 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
GFRA1P56159 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC13.18□□□□□ -0.3
GFRA1P56159 DEF8-202ENST00000418391 852 ntTSL 2 BASIC13.18□□□□□ -0.3
GFRA1P56159 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC13.18□□□□□ -0.3
GFRA1P56159 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
GFRA1P56159 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
GFRA1P56159 AC125604.1-201ENST00000496255 707 ntBASIC13.18□□□□□ -0.3
GFRA1P56159 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC13.18□□□□□ -0.3
GFRA1P56159 SDHD-202ENST00000525291 790 ntTSL 3 BASIC13.18□□□□□ -0.3
GFRA1P56159 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC13.18□□□□□ -0.3
GFRA1P56159 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
GFRA1P56159 AC133540.1-201ENST00000620845 1019 ntBASIC13.18□□□□□ -0.3
GFRA1P56159 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC13.18□□□□□ -0.3
GFRA1P56159 AC100757.4-201ENST00000626934 759 ntBASIC13.18□□□□□ -0.3
GFRA1P56159 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
GFRA1P56159 RER1-203ENST00000378513 3000 ntTSL 3 BASIC13.18□□□□□ -0.3
GFRA1P56159 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
GFRA1P56159 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC13.18□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 74.3 ms