Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC15.05■□□□□ 0
CDH4P55283 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC15.05■□□□□ 0
CDH4P55283 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC15.05■□□□□ 0
CDH4P55283 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC15.05■□□□□ 0
CDH4P55283 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ 0
CDH4P55283 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC15.05■□□□□ 0
CDH4P55283 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
CDH4P55283 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
CDH4P55283 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ 0
CDH4P55283 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC15.05■□□□□ -0
CDH4P55283 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC15.05■□□□□ -0
CDH4P55283 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC15.05■□□□□ -0
CDH4P55283 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC15.05■□□□□ -0
CDH4P55283 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC15.05■□□□□ -0
CDH4P55283 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CDH4P55283 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC15.05■□□□□ -0
CDH4P55283 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC15.05■□□□□ -0
CDH4P55283 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC15.05■□□□□ -0
CDH4P55283 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CDH4P55283 CSH2-202ENST00000345366 598 ntTSL 5 BASIC15.05■□□□□ -0
CDH4P55283 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC15.05■□□□□ -0
CDH4P55283 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CDH4P55283 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC15.05■□□□□ -0
CDH4P55283 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC15.05■□□□□ -0
CDH4P55283 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC15.05■□□□□ -0
CDH4P55283 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC15.05■□□□□ -0
CDH4P55283 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC15.05■□□□□ -0
CDH4P55283 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC15.05■□□□□ -0
CDH4P55283 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC15.05■□□□□ -0
CDH4P55283 ZNF767P-206ENST00000513792 565 ntBASIC15.05■□□□□ -0
CDH4P55283 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
CDH4P55283 AC044849.1-201ENST00000519737 1188 ntBASIC15.05■□□□□ -0
CDH4P55283 AL160314.3-201ENST00000556041 767 ntBASIC15.05■□□□□ -0
CDH4P55283 EID1-202ENST00000560490 584 ntTSL 3 BASIC15.05■□□□□ -0
CDH4P55283 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC15.05■□□□□ -0
CDH4P55283 KC6-205ENST00000599934 556 ntTSL 4 BASIC15.05■□□□□ -0
CDH4P55283 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC15.05■□□□□ -0
CDH4P55283 AL136295.7-201ENST00000619226 1200 ntBASIC15.05■□□□□ -0
CDH4P55283 AC068587.8-201ENST00000641239 219 ntBASIC15.05■□□□□ -0
CDH4P55283 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC15.05■□□□□ -0
CDH4P55283 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CDH4P55283 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CDH4P55283 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC15.05■□□□□ -0
CDH4P55283 TMBIM7P-202ENST00000641474 1516 ntBASIC15.05■□□□□ -0
CDH4P55283 MVK-214ENST00000629016 1591 ntTSL 5 BASIC15.05■□□□□ -0
CDH4P55283 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC15.05■□□□□ -0
CDH4P55283 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CDH4P55283 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CDH4P55283 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC15.05■□□□□ -0
CDH4P55283 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC15.05■□□□□ -0
CDH4P55283 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC15.05■□□□□ -0
CDH4P55283 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC15.05■□□□□ -0
CDH4P55283 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
CDH4P55283 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
CDH4P55283 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ -0
CDH4P55283 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC15.05■□□□□ -0
CDH4P55283 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CDH4P55283 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC15.05■□□□□ -0
CDH4P55283 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CDH4P55283 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
CDH4P55283 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
CDH4P55283 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CDH4P55283 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC15.04■□□□□ -0
CDH4P55283 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CDH4P55283 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC15.04■□□□□ -0
CDH4P55283 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
CDH4P55283 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC15.04■□□□□ -0
CDH4P55283 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CDH4P55283 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC15.04■□□□□ -0
CDH4P55283 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CDH4P55283 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CDH4P55283 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC15.04■□□□□ -0
CDH4P55283 MBLAC2-202ENST00000514906 1936 ntBASIC15.04■□□□□ -0
CDH4P55283 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
CDH4P55283 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
CDH4P55283 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC15.04■□□□□ -0
CDH4P55283 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CDH4P55283 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CDH4P55283 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
CDH4P55283 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CDH4P55283 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC15.04■□□□□ -0
CDH4P55283 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CDH4P55283 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC15.04■□□□□ -0
CDH4P55283 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CDH4P55283 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CDH4P55283 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC15.04■□□□□ -0
CDH4P55283 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC15.04■□□□□ -0
CDH4P55283 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC15.04■□□□□ -0
CDH4P55283 NKAIN1P1-201ENST00000435754 582 ntBASIC15.04■□□□□ -0
CDH4P55283 VDAC1P1-201ENST00000439229 848 ntBASIC15.04■□□□□ -0
CDH4P55283 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC15.04■□□□□ -0
CDH4P55283 AC099548.2-209ENST00000480264 625 ntBASIC15.04■□□□□ -0
CDH4P55283 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC15.04■□□□□ -0
CDH4P55283 IGHVIII-5-2-201ENST00000522505 261 ntBASIC15.04■□□□□ -0
CDH4P55283 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC15.04■□□□□ -0
CDH4P55283 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC15.04■□□□□ -0
CDH4P55283 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC15.04■□□□□ -0
CDH4P55283 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC15.04■□□□□ -0
CDH4P55283 AC027237.1-201ENST00000560942 655 ntBASIC15.04■□□□□ -0
CDH4P55283 AC008805.1-201ENST00000590892 364 ntBASIC15.04■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms