Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC10.84□□□□□ -0.67
APOC4P55056 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC10.84□□□□□ -0.67
APOC4P55056 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC10.84□□□□□ -0.67
APOC4P55056 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
APOC4P55056 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
APOC4P55056 CACNA1G-232ENST00000515411 6960 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
APOC4P55056 CACNA1G-233ENST00000515765 6981 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
APOC4P55056 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
APOC4P55056 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC10.83□□□□□ -0.68
APOC4P55056 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
APOC4P55056 CEP126-201ENST00000263468 7039 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
APOC4P55056 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC10.83□□□□□ -0.68
APOC4P55056 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
APOC4P55056 AC023157.3-201ENST00000619086 2088 ntBASIC10.83□□□□□ -0.68
APOC4P55056 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
APOC4P55056 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
APOC4P55056 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC10.83□□□□□ -0.68
APOC4P55056 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
APOC4P55056 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
APOC4P55056 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
APOC4P55056 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
APOC4P55056 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
APOC4P55056 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
APOC4P55056 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
APOC4P55056 IKZF1-203ENST00000346667 5376 ntTSL 5 BASIC10.83□□□□□ -0.68
APOC4P55056 LAMB1-201ENST00000222399 5725 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
APOC4P55056 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
APOC4P55056 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
APOC4P55056 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC10.83□□□□□ -0.68
APOC4P55056 SMS-201ENST00000379404 1174 ntTSL 3 BASIC10.83□□□□□ -0.68
APOC4P55056 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
APOC4P55056 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
APOC4P55056 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC10.83□□□□□ -0.68
APOC4P55056 RNMTL1P1-201ENST00000454103 560 ntBASIC10.83□□□□□ -0.68
APOC4P55056 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC10.83□□□□□ -0.68
APOC4P55056 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
APOC4P55056 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC10.83□□□□□ -0.68
APOC4P55056 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
APOC4P55056 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC10.83□□□□□ -0.68
APOC4P55056 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC10.83□□□□□ -0.68
APOC4P55056 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
APOC4P55056 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC10.83□□□□□ -0.68
APOC4P55056 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC10.83□□□□□ -0.68
APOC4P55056 BNIP3P13-201ENST00000599968 566 ntBASIC10.83□□□□□ -0.68
APOC4P55056 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC10.83□□□□□ -0.68
APOC4P55056 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC10.83□□□□□ -0.68
APOC4P55056 MIR6720-201ENST00000611664 98 ntBASIC10.83□□□□□ -0.68
APOC4P55056 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
APOC4P55056 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC10.83□□□□□ -0.68
APOC4P55056 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
APOC4P55056 MVK-217ENST00000639206 367 ntTSL 5 BASIC10.83□□□□□ -0.68
APOC4P55056 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
APOC4P55056 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
APOC4P55056 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
APOC4P55056 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
APOC4P55056 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
APOC4P55056 AMT-239ENST00000636865 1914 ntTSL 5 BASIC10.83□□□□□ -0.68
APOC4P55056 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
APOC4P55056 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC10.83□□□□□ -0.68
APOC4P55056 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC10.83□□□□□ -0.68
APOC4P55056 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
APOC4P55056 E2F3P2-201ENST00000447755 1422 ntBASIC10.83□□□□□ -0.68
APOC4P55056 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
APOC4P55056 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC10.83□□□□□ -0.68
APOC4P55056 LINC01101-201ENST00000622953 1884 ntBASIC10.83□□□□□ -0.68
APOC4P55056 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
APOC4P55056 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
APOC4P55056 AL008718.2-201ENST00000609206 1313 ntBASIC10.83□□□□□ -0.68
APOC4P55056 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
APOC4P55056 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
APOC4P55056 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
APOC4P55056 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC10.82□□□□□ -0.68
APOC4P55056 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
APOC4P55056 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
APOC4P55056 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC10.82□□□□□ -0.68
APOC4P55056 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
APOC4P55056 FLNC-202ENST00000346177 9042 ntAPPRIS ALT1 TSL 1 (best) BASIC10.82□□□□□ -0.68
APOC4P55056 AC006486.2-201ENST00000624246 2199 ntBASIC10.82□□□□□ -0.68
APOC4P55056 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC10.82□□□□□ -0.68
APOC4P55056 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC10.82□□□□□ -0.68
APOC4P55056 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
APOC4P55056 AC004899.1-201ENST00000424687 1714 ntBASIC10.82□□□□□ -0.68
APOC4P55056 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
APOC4P55056 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
APOC4P55056 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
APOC4P55056 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
APOC4P55056 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC10.82□□□□□ -0.68
APOC4P55056 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
APOC4P55056 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
APOC4P55056 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
APOC4P55056 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC10.82□□□□□ -0.68
APOC4P55056 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
APOC4P55056 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC10.82□□□□□ -0.68
APOC4P55056 FNTAP2-201ENST00000430308 634 ntBASIC10.82□□□□□ -0.68
APOC4P55056 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC10.82□□□□□ -0.68
APOC4P55056 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC10.82□□□□□ -0.68
APOC4P55056 BX284668.4-201ENST00000453917 508 ntBASIC10.82□□□□□ -0.68
APOC4P55056 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC10.82□□□□□ -0.68
APOC4P55056 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC10.82□□□□□ -0.68
APOC4P55056 AC044849.1-201ENST00000519737 1188 ntBASIC10.82□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 67.3 ms