Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 RPL28-204ENST00000431533 590 ntTSL 2 BASIC15.42■□□□□ 0.06
MMP13P45452 PNKD-204ENST00000436005 978 ntTSL 5 BASIC15.42■□□□□ 0.06
MMP13P45452 AL355864.2-201ENST00000447420 863 ntBASIC15.42■□□□□ 0.06
MMP13P45452 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
MMP13P45452 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC15.42■□□□□ 0.06
MMP13P45452 AP001889.1-201ENST00000525414 633 ntBASIC15.42■□□□□ 0.06
MMP13P45452 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
MMP13P45452 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
MMP13P45452 CR383656.12-201ENST00000549567 513 ntBASIC15.42■□□□□ 0.06
MMP13P45452 RPL28-207ENST00000558815 616 ntTSL 2 BASIC15.42■□□□□ 0.06
MMP13P45452 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC15.42■□□□□ 0.06
MMP13P45452 RPS15-202ENST00000585665 467 ntTSL 3 BASIC15.42■□□□□ 0.06
MMP13P45452 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC15.42■□□□□ 0.06
MMP13P45452 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC15.42■□□□□ 0.06
MMP13P45452 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC15.42■□□□□ 0.06
MMP13P45452 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
MMP13P45452 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC15.42■□□□□ 0.06
MMP13P45452 MAPT-IT1-201ENST00000624111 3016 ntBASIC15.42■□□□□ 0.06
MMP13P45452 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
MMP13P45452 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
MMP13P45452 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
MMP13P45452 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
MMP13P45452 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC15.42■□□□□ 0.06
MMP13P45452 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
MMP13P45452 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
MMP13P45452 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC15.42■□□□□ 0.06
MMP13P45452 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
MMP13P45452 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
MMP13P45452 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
MMP13P45452 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC15.41■□□□□ 0.06
MMP13P45452 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC15.41■□□□□ 0.06
MMP13P45452 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
MMP13P45452 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
MMP13P45452 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
MMP13P45452 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
MMP13P45452 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
MMP13P45452 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC15.41■□□□□ 0.06
MMP13P45452 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
MMP13P45452 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
MMP13P45452 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
MMP13P45452 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
MMP13P45452 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC15.41■□□□□ 0.06
MMP13P45452 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
MMP13P45452 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
MMP13P45452 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
MMP13P45452 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
MMP13P45452 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
MMP13P45452 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC15.41■□□□□ 0.06
MMP13P45452 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
MMP13P45452 TMEM198B-204ENST00000484016 896 ntBASIC15.41■□□□□ 0.06
MMP13P45452 USP32P1-208ENST00000506594 1164 ntBASIC15.41■□□□□ 0.06
MMP13P45452 AC106760.1-201ENST00000508690 800 ntBASIC15.41■□□□□ 0.06
MMP13P45452 SLC25A47P1-201ENST00000531577 414 ntBASIC15.41■□□□□ 0.06
MMP13P45452 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC15.41■□□□□ 0.06
MMP13P45452 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
MMP13P45452 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
MMP13P45452 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC15.41■□□□□ 0.06
MMP13P45452 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC15.41■□□□□ 0.06
MMP13P45452 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC15.41■□□□□ 0.06
MMP13P45452 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC15.41■□□□□ 0.06
MMP13P45452 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
MMP13P45452 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC15.41■□□□□ 0.06
MMP13P45452 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
MMP13P45452 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
MMP13P45452 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
MMP13P45452 AC015818.8-201ENST00000587907 1519 ntBASIC15.41■□□□□ 0.06
MMP13P45452 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
MMP13P45452 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
MMP13P45452 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
MMP13P45452 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
MMP13P45452 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
MMP13P45452 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
MMP13P45452 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
MMP13P45452 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC15.41■□□□□ 0.06
MMP13P45452 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC15.41■□□□□ 0.06
MMP13P45452 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
MMP13P45452 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
MMP13P45452 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
MMP13P45452 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
MMP13P45452 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
MMP13P45452 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC15.4■□□□□ 0.06
MMP13P45452 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
MMP13P45452 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
MMP13P45452 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
MMP13P45452 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
MMP13P45452 MX1-218ENST00000619682 1980 ntTSL 5 BASIC15.4■□□□□ 0.06
MMP13P45452 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC15.4■□□□□ 0.06
MMP13P45452 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
MMP13P45452 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
MMP13P45452 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC15.4■□□□□ 0.06
MMP13P45452 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC15.4■□□□□ 0.06
MMP13P45452 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
MMP13P45452 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
MMP13P45452 AC005229.1-201ENST00000392885 409 ntBASIC15.4■□□□□ 0.06
MMP13P45452 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC15.4■□□□□ 0.06
MMP13P45452 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC15.4■□□□□ 0.06
MMP13P45452 AC026434.2-201ENST00000506094 1078 ntBASIC15.4■□□□□ 0.06
MMP13P45452 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC15.4■□□□□ 0.06
MMP13P45452 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
MMP13P45452 AC233724.13-201ENST00000598383 410 ntBASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms