Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC15.82■□□□□ 0.12
HOXC8P31273 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC15.82■□□□□ 0.12
HOXC8P31273 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
HOXC8P31273 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
HOXC8P31273 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HOXC8P31273 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC15.82■□□□□ 0.12
HOXC8P31273 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC15.81■□□□□ 0.12
HOXC8P31273 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HOXC8P31273 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HOXC8P31273 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
HOXC8P31273 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC15.81■□□□□ 0.12
HOXC8P31273 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
HOXC8P31273 PON3-201ENST00000265627 1105 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HOXC8P31273 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HOXC8P31273 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HOXC8P31273 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC15.81■□□□□ 0.12
HOXC8P31273 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HOXC8P31273 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC15.81■□□□□ 0.12
HOXC8P31273 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
HOXC8P31273 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
HOXC8P31273 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
HOXC8P31273 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
HOXC8P31273 ACTG2-204ENST00000409918 927 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
HOXC8P31273 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HOXC8P31273 FES-204ENST00000414248 2327 ntTSL 2 BASIC15.81■□□□□ 0.12
HOXC8P31273 NDUFS7-203ENST00000414651 841 ntTSL 5 BASIC15.81■□□□□ 0.12
HOXC8P31273 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC15.81■□□□□ 0.12
HOXC8P31273 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
HOXC8P31273 AC097065.1-201ENST00000425737 517 ntBASIC15.81■□□□□ 0.12
HOXC8P31273 LINC00028-201ENST00000435497 587 ntTSL 2 BASIC15.81■□□□□ 0.12
HOXC8P31273 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC15.81■□□□□ 0.12
HOXC8P31273 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC15.81■□□□□ 0.12
HOXC8P31273 MINDY4B-201ENST00000465419 1383 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
HOXC8P31273 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC15.81■□□□□ 0.12
HOXC8P31273 SNCB-203ENST00000506696 552 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
HOXC8P31273 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC15.81■□□□□ 0.12
HOXC8P31273 AC012645.2-201ENST00000566190 553 ntTSL 4 BASIC15.81■□□□□ 0.12
HOXC8P31273 AC145207.8-201ENST00000580897 563 ntTSL 4 BASIC15.81■□□□□ 0.12
HOXC8P31273 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC15.81■□□□□ 0.12
HOXC8P31273 AC137723.1-201ENST00000584705 709 ntTSL 3 BASIC15.81■□□□□ 0.12
HOXC8P31273 AC011481.2-201ENST00000585408 426 ntTSL 3 BASIC15.81■□□□□ 0.12
HOXC8P31273 GPI-205ENST00000586425 1799 ntTSL 5 BASIC15.81■□□□□ 0.12
HOXC8P31273 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
HOXC8P31273 AC061992.1-201ENST00000592569 777 ntTSL 3 BASIC15.81■□□□□ 0.12
HOXC8P31273 DBP-202ENST00000593500 712 ntTSL 2 BASIC15.81■□□□□ 0.12
HOXC8P31273 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC15.81■□□□□ 0.12
HOXC8P31273 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
HOXC8P31273 AC140113.1-201ENST00000603467 169 ntBASIC15.81■□□□□ 0.12
HOXC8P31273 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC15.81■□□□□ 0.12
HOXC8P31273 MIR6756-201ENST00000616240 63 ntBASIC15.81■□□□□ 0.12
HOXC8P31273 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC15.81■□□□□ 0.12
HOXC8P31273 AC067931.2-201ENST00000623655 2003 ntBASIC15.81■□□□□ 0.12
HOXC8P31273 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HOXC8P31273 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
HOXC8P31273 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HOXC8P31273 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
HOXC8P31273 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HOXC8P31273 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
HOXC8P31273 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HOXC8P31273 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HOXC8P31273 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HOXC8P31273 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
HOXC8P31273 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
HOXC8P31273 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HOXC8P31273 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC15.8■□□□□ 0.12
HOXC8P31273 OXA1L-212ENST00000604262 1571 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HOXC8P31273 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HOXC8P31273 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC15.8■□□□□ 0.12
HOXC8P31273 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
HOXC8P31273 CCDC51-206ENST00000447018 1461 ntTSL 2 BASIC15.8■□□□□ 0.12
HOXC8P31273 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC15.8■□□□□ 0.12
HOXC8P31273 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HOXC8P31273 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
HOXC8P31273 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HOXC8P31273 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
HOXC8P31273 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
HOXC8P31273 MARS-233ENST00000628866 2583 ntTSL 5 BASIC15.8■□□□□ 0.12
HOXC8P31273 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC15.8■□□□□ 0.12
HOXC8P31273 AL935212.1-201ENST00000377548 906 ntTSL 5 BASIC15.8■□□□□ 0.12
HOXC8P31273 CELP-201ENST00000411440 1249 ntTSL 5 BASIC15.8■□□□□ 0.12
HOXC8P31273 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
HOXC8P31273 IGF1-205ENST00000424202 612 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HOXC8P31273 CSNK1G2P1-201ENST00000442675 955 ntBASIC15.8■□□□□ 0.12
HOXC8P31273 AC098934.1-203ENST00000442868 1262 ntBASIC15.8■□□□□ 0.12
HOXC8P31273 ZAP70-202ENST00000451498 1085 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
HOXC8P31273 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC15.8■□□□□ 0.12
HOXC8P31273 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC15.8■□□□□ 0.12
HOXC8P31273 NAA40-205ENST00000539656 577 ntTSL 4 BASIC15.8■□□□□ 0.12
HOXC8P31273 AL355916.2-201ENST00000556543 593 ntTSL 4 BASIC15.8■□□□□ 0.12
HOXC8P31273 AC068867.1-201ENST00000559855 150 ntBASIC15.8■□□□□ 0.12
HOXC8P31273 AC015917.2-201ENST00000580714 493 ntTSL 3 BASIC15.8■□□□□ 0.12
HOXC8P31273 ZNF790-AS1-203ENST00000588906 850 ntTSL 2 BASIC15.8■□□□□ 0.12
HOXC8P31273 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
HOXC8P31273 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
HOXC8P31273 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HOXC8P31273 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
HOXC8P31273 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
HOXC8P31273 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC15.8■□□□□ 0.12
HOXC8P31273 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC15.8■□□□□ 0.12
HOXC8P31273 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 63.8 ms