Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC14.67□□□□□ -0.06
VARSP26640 USE1-206ENST00000595101 1776 ntTSL 2 BASIC14.67□□□□□ -0.06
VARSP26640 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
VARSP26640 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
VARSP26640 AC136759.1-202ENST00000530858 2194 ntBASIC14.67□□□□□ -0.06
VARSP26640 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC14.67□□□□□ -0.06
VARSP26640 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC14.67□□□□□ -0.06
VARSP26640 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC14.67□□□□□ -0.06
VARSP26640 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC14.66□□□□□ -0.06
VARSP26640 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
VARSP26640 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
VARSP26640 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
VARSP26640 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
VARSP26640 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC14.66□□□□□ -0.06
VARSP26640 TCAF1P1-201ENST00000414990 2232 ntBASIC14.66□□□□□ -0.06
VARSP26640 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC14.66□□□□□ -0.06
VARSP26640 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC14.66□□□□□ -0.06
VARSP26640 OS9-201ENST00000257966 2505 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
VARSP26640 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
VARSP26640 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
VARSP26640 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
VARSP26640 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
VARSP26640 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC14.66□□□□□ -0.06
VARSP26640 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
VARSP26640 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
VARSP26640 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
VARSP26640 AGER-206ENST00000375070 1463 ntTSL 5 BASIC14.66□□□□□ -0.06
VARSP26640 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
VARSP26640 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
VARSP26640 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
VARSP26640 AL645937.2-201ENST00000396808 931 ntBASIC14.66□□□□□ -0.06
VARSP26640 NME6-203ENST00000415644 849 ntTSL 2 BASIC14.66□□□□□ -0.06
VARSP26640 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC14.66□□□□□ -0.06
VARSP26640 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC14.66□□□□□ -0.06
VARSP26640 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC14.66□□□□□ -0.06
VARSP26640 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC14.66□□□□□ -0.06
VARSP26640 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC14.66□□□□□ -0.06
VARSP26640 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
VARSP26640 CLUHP6-201ENST00000580789 941 ntBASIC14.66□□□□□ -0.06
VARSP26640 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC14.66□□□□□ -0.06
VARSP26640 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
VARSP26640 CU634019.7-201ENST00000624153 1185 ntBASIC14.66□□□□□ -0.06
VARSP26640 FP236241.2-201ENST00000624906 1185 ntBASIC14.66□□□□□ -0.06
VARSP26640 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
VARSP26640 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
VARSP26640 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
VARSP26640 DLX3-201ENST00000434704 2602 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
VARSP26640 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC14.66□□□□□ -0.06
VARSP26640 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
VARSP26640 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC14.66□□□□□ -0.06
VARSP26640 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
VARSP26640 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
VARSP26640 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
VARSP26640 MBLAC2-202ENST00000514906 1936 ntBASIC14.66□□□□□ -0.06
VARSP26640 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
VARSP26640 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
VARSP26640 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
VARSP26640 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
VARSP26640 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
VARSP26640 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC14.66□□□□□ -0.06
VARSP26640 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
VARSP26640 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
VARSP26640 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC14.66□□□□□ -0.06
VARSP26640 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
VARSP26640 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
VARSP26640 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
VARSP26640 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
VARSP26640 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC14.65□□□□□ -0.06
VARSP26640 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC14.65□□□□□ -0.06
VARSP26640 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
VARSP26640 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC14.65□□□□□ -0.06
VARSP26640 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
VARSP26640 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
VARSP26640 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
VARSP26640 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
VARSP26640 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
VARSP26640 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
VARSP26640 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
VARSP26640 HSPA7-201ENST00000445535 1927 ntBASIC14.65□□□□□ -0.06
VARSP26640 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
VARSP26640 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC14.65□□□□□ -0.06
VARSP26640 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
VARSP26640 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
VARSP26640 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC14.65□□□□□ -0.06
VARSP26640 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
VARSP26640 BRF1-202ENST00000379932 884 ntTSL 5 BASIC14.65□□□□□ -0.06
VARSP26640 AL139094.1-201ENST00000405549 1188 ntBASIC14.65□□□□□ -0.06
VARSP26640 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC14.65□□□□□ -0.06
VARSP26640 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC14.65□□□□□ -0.06
VARSP26640 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC14.65□□□□□ -0.06
VARSP26640 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
VARSP26640 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
VARSP26640 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
VARSP26640 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC14.65□□□□□ -0.06
VARSP26640 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
VARSP26640 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC14.65□□□□□ -0.06
VARSP26640 BTNL10-201ENST00000595971 695 ntBASIC14.65□□□□□ -0.06
VARSP26640 AC007386.2-202ENST00000622718 1018 ntTSL 3 BASIC14.65□□□□□ -0.06
VARSP26640 PRSS30P-206ENST00000641773 873 ntBASIC14.65□□□□□ -0.06
VARSP26640 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms