Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC13.78□□□□□ -0.2
UBL4AP11441 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC13.78□□□□□ -0.2
UBL4AP11441 INE1-201ENST00000456273 945 ntBASIC13.78□□□□□ -0.2
UBL4AP11441 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
UBL4AP11441 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC13.78□□□□□ -0.2
UBL4AP11441 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC13.78□□□□□ -0.2
UBL4AP11441 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
UBL4AP11441 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
UBL4AP11441 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC13.78□□□□□ -0.2
UBL4AP11441 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC13.78□□□□□ -0.2
UBL4AP11441 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
UBL4AP11441 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC13.78□□□□□ -0.2
UBL4AP11441 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC13.78□□□□□ -0.2
UBL4AP11441 AC145423.3-201ENST00000615987 467 ntBASIC13.78□□□□□ -0.2
UBL4AP11441 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC13.78□□□□□ -0.2
UBL4AP11441 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC13.78□□□□□ -0.2
UBL4AP11441 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC13.78□□□□□ -0.2
UBL4AP11441 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
UBL4AP11441 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
UBL4AP11441 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
UBL4AP11441 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
UBL4AP11441 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
UBL4AP11441 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC13.78□□□□□ -0.2
UBL4AP11441 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
UBL4AP11441 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC13.78□□□□□ -0.2
UBL4AP11441 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC13.78□□□□□ -0.2
UBL4AP11441 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
UBL4AP11441 API5-203ENST00000455725 2257 ntTSL 2 BASIC13.78□□□□□ -0.2
UBL4AP11441 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC13.78□□□□□ -0.2
UBL4AP11441 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC13.78□□□□□ -0.2
UBL4AP11441 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
UBL4AP11441 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC13.77□□□□□ -0.2
UBL4AP11441 COCH-203ENST00000460581 2688 ntTSL 2 BASIC13.77□□□□□ -0.2
UBL4AP11441 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
UBL4AP11441 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC13.77□□□□□ -0.2
UBL4AP11441 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC13.77□□□□□ -0.2
UBL4AP11441 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
UBL4AP11441 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
UBL4AP11441 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
UBL4AP11441 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
UBL4AP11441 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
UBL4AP11441 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.2
UBL4AP11441 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
UBL4AP11441 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
UBL4AP11441 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
UBL4AP11441 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
UBL4AP11441 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
UBL4AP11441 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
UBL4AP11441 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
UBL4AP11441 C5AR1-201ENST00000355085 2311 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
UBL4AP11441 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
UBL4AP11441 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC13.77□□□□□ -0.21
UBL4AP11441 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC13.77□□□□□ -0.21
UBL4AP11441 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC13.77□□□□□ -0.21
UBL4AP11441 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC13.77□□□□□ -0.21
UBL4AP11441 AL512384.1-201ENST00000406683 331 ntBASIC13.77□□□□□ -0.21
UBL4AP11441 BEND3P1-201ENST00000421591 1944 ntBASIC13.77□□□□□ -0.21
UBL4AP11441 RPL28-203ENST00000428193 573 ntTSL 2 BASIC13.77□□□□□ -0.21
UBL4AP11441 RPL28-204ENST00000431533 590 ntTSL 2 BASIC13.77□□□□□ -0.21
UBL4AP11441 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC13.77□□□□□ -0.21
UBL4AP11441 AC007969.1-201ENST00000433675 447 ntBASIC13.77□□□□□ -0.21
UBL4AP11441 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
UBL4AP11441 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC13.77□□□□□ -0.21
UBL4AP11441 TTTY23B-201ENST00000442790 549 ntBASIC13.77□□□□□ -0.21
UBL4AP11441 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC13.77□□□□□ -0.21
UBL4AP11441 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
UBL4AP11441 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
UBL4AP11441 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC13.77□□□□□ -0.21
UBL4AP11441 AP005018.1-201ENST00000525475 301 ntBASIC13.77□□□□□ -0.21
UBL4AP11441 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.21
UBL4AP11441 FOS-202ENST00000535987 1402 ntTSL 2 BASIC13.77□□□□□ -0.21
UBL4AP11441 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC13.77□□□□□ -0.21
UBL4AP11441 RPL28-207ENST00000558815 616 ntTSL 2 BASIC13.77□□□□□ -0.21
UBL4AP11441 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
UBL4AP11441 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
UBL4AP11441 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
UBL4AP11441 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
UBL4AP11441 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
UBL4AP11441 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.21
UBL4AP11441 CU639417.3-201ENST00000624240 1404 ntBASIC13.77□□□□□ -0.21
UBL4AP11441 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
UBL4AP11441 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC13.77□□□□□ -0.21
UBL4AP11441 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
UBL4AP11441 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.21
UBL4AP11441 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC13.77□□□□□ -0.21
UBL4AP11441 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC13.77□□□□□ -0.21
UBL4AP11441 DCAF4-203ENST00000394234 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
UBL4AP11441 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
UBL4AP11441 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
UBL4AP11441 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC13.76□□□□□ -0.21
UBL4AP11441 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
UBL4AP11441 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
UBL4AP11441 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
UBL4AP11441 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
UBL4AP11441 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC13.76□□□□□ -0.21
UBL4AP11441 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC13.76□□□□□ -0.21
UBL4AP11441 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
UBL4AP11441 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
UBL4AP11441 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
UBL4AP11441 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC13.76□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms