Protein–RNA interactions for Protein: P11230

CHRNB1, Acetylcholine receptor subunit beta, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1P11230 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
CHRNB1P11230 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
CHRNB1P11230 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CHRNB1P11230 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC14.96□□□□□ -0.01
CHRNB1P11230 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CHRNB1P11230 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CHRNB1P11230 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CHRNB1P11230 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
CHRNB1P11230 AC090616.6-203ENST00000579186 1945 ntBASIC14.96□□□□□ -0.01
CHRNB1P11230 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC14.96□□□□□ -0.01
CHRNB1P11230 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
CHRNB1P11230 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CHRNB1P11230 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.01
CHRNB1P11230 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
CHRNB1P11230 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CHRNB1P11230 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CHRNB1P11230 SOD2-202ENST00000367054 815 ntTSL 2 BASIC14.96□□□□□ -0.01
CHRNB1P11230 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
CHRNB1P11230 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC14.96□□□□□ -0.01
CHRNB1P11230 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC14.96□□□□□ -0.01
CHRNB1P11230 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC14.96□□□□□ -0.01
CHRNB1P11230 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
CHRNB1P11230 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CHRNB1P11230 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC14.96□□□□□ -0.01
CHRNB1P11230 IGHV3-37-201ENST00000518544 340 ntBASIC14.96□□□□□ -0.01
CHRNB1P11230 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC14.96□□□□□ -0.01
CHRNB1P11230 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC14.96□□□□□ -0.01
CHRNB1P11230 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
CHRNB1P11230 MIR3188-201ENST00000583494 85 ntBASIC14.96□□□□□ -0.01
CHRNB1P11230 SIGLEC18P-201ENST00000602271 909 ntBASIC14.96□□□□□ -0.01
CHRNB1P11230 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.01
CHRNB1P11230 AC025271.4-201ENST00000621477 1726 ntBASIC14.96□□□□□ -0.01
CHRNB1P11230 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC14.96□□□□□ -0.01
CHRNB1P11230 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
CHRNB1P11230 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CHRNB1P11230 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CHRNB1P11230 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CHRNB1P11230 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
CHRNB1P11230 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CHRNB1P11230 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC14.96□□□□□ -0.01
CHRNB1P11230 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
CHRNB1P11230 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
CHRNB1P11230 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
CHRNB1P11230 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
CHRNB1P11230 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
CHRNB1P11230 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC14.96□□□□□ -0.02
CHRNB1P11230 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
CHRNB1P11230 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
CHRNB1P11230 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC14.96□□□□□ -0.02
CHRNB1P11230 SALL4P5-201ENST00000419001 1760 ntBASIC14.96□□□□□ -0.02
CHRNB1P11230 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC14.96□□□□□ -0.02
CHRNB1P11230 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CHRNB1P11230 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
CHRNB1P11230 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CHRNB1P11230 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CHRNB1P11230 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC14.95□□□□□ -0.02
CHRNB1P11230 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CHRNB1P11230 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC14.95□□□□□ -0.02
CHRNB1P11230 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CHRNB1P11230 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CHRNB1P11230 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
CHRNB1P11230 MBP-201ENST00000354542 575 ntTSL 2 BASIC14.95□□□□□ -0.02
CHRNB1P11230 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CHRNB1P11230 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CHRNB1P11230 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC14.95□□□□□ -0.02
CHRNB1P11230 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
CHRNB1P11230 MIR557-201ENST00000385239 98 ntBASIC14.95□□□□□ -0.02
CHRNB1P11230 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
CHRNB1P11230 AL583805.1-201ENST00000391389 531 ntBASIC14.95□□□□□ -0.02
CHRNB1P11230 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CHRNB1P11230 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC14.95□□□□□ -0.02
CHRNB1P11230 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC14.95□□□□□ -0.02
CHRNB1P11230 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
CHRNB1P11230 RPL37A-203ENST00000427280 698 ntTSL 5 BASIC14.95□□□□□ -0.02
CHRNB1P11230 XBP1P1-201ENST00000436573 652 ntBASIC14.95□□□□□ -0.02
CHRNB1P11230 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC14.95□□□□□ -0.02
CHRNB1P11230 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CHRNB1P11230 RPL37A-206ENST00000456586 401 ntTSL 5 BASIC14.95□□□□□ -0.02
CHRNB1P11230 BUD31-205ENST00000456893 512 ntTSL 5 BASIC14.95□□□□□ -0.02
CHRNB1P11230 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CHRNB1P11230 NDUFS6P1-201ENST00000485187 316 ntBASIC14.95□□□□□ -0.02
CHRNB1P11230 GCOM2-201ENST00000509133 1104 ntBASIC14.95□□□□□ -0.02
CHRNB1P11230 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC14.95□□□□□ -0.02
CHRNB1P11230 VPS18-202ENST00000558474 873 ntTSL 3 BASIC14.95□□□□□ -0.02
CHRNB1P11230 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC14.95□□□□□ -0.02
CHRNB1P11230 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC14.95□□□□□ -0.02
CHRNB1P11230 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC14.95□□□□□ -0.02
CHRNB1P11230 RPL37A-211ENST00000598925 775 ntTSL 5 BASIC14.95□□□□□ -0.02
CHRNB1P11230 PRMT5-AS1-206ENST00000599580 847 ntTSL 5 BASIC14.95□□□□□ -0.02
CHRNB1P11230 DDX5-235ENST00000630471 473 ntTSL 4 BASIC14.95□□□□□ -0.02
CHRNB1P11230 PRAL-201ENST00000624952 3286 ntBASIC14.95□□□□□ -0.02
CHRNB1P11230 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC14.95□□□□□ -0.02
CHRNB1P11230 ZBED1P1-201ENST00000502364 1930 ntBASIC14.95□□□□□ -0.02
CHRNB1P11230 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC14.95□□□□□ -0.02
CHRNB1P11230 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC14.95□□□□□ -0.02
CHRNB1P11230 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CHRNB1P11230 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CHRNB1P11230 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CHRNB1P11230 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CHRNB1P11230 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms