Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
RAB40ALP0C0E4 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC13.95□□□□□ -0.18
RAB40ALP0C0E4 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
RAB40ALP0C0E4 MARS-233ENST00000628866 2583 ntTSL 5 BASIC13.95□□□□□ -0.18
RAB40ALP0C0E4 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RAB40ALP0C0E4 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
RAB40ALP0C0E4 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
RAB40ALP0C0E4 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RAB40ALP0C0E4 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RAB40ALP0C0E4 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RAB40ALP0C0E4 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC13.95□□□□□ -0.18
RAB40ALP0C0E4 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
RAB40ALP0C0E4 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC13.95□□□□□ -0.18
RAB40ALP0C0E4 AL359258.3-201ENST00000622910 2331 ntBASIC13.95□□□□□ -0.18
RAB40ALP0C0E4 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC13.95□□□□□ -0.18
RAB40ALP0C0E4 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RAB40ALP0C0E4 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC13.94□□□□□ -0.18
RAB40ALP0C0E4 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RAB40ALP0C0E4 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC13.94□□□□□ -0.18
RAB40ALP0C0E4 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RAB40ALP0C0E4 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
RAB40ALP0C0E4 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
RAB40ALP0C0E4 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
RAB40ALP0C0E4 KRT8P19-201ENST00000551916 1455 ntBASIC13.94□□□□□ -0.18
RAB40ALP0C0E4 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
RAB40ALP0C0E4 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC13.94□□□□□ -0.18
RAB40ALP0C0E4 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
RAB40ALP0C0E4 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC13.94□□□□□ -0.18
RAB40ALP0C0E4 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC13.94□□□□□ -0.18
RAB40ALP0C0E4 SALL4P5-201ENST00000419001 1760 ntBASIC13.94□□□□□ -0.18
RAB40ALP0C0E4 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC13.94□□□□□ -0.18
RAB40ALP0C0E4 AMT-239ENST00000636865 1914 ntTSL 5 BASIC13.94□□□□□ -0.18
RAB40ALP0C0E4 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC13.94□□□□□ -0.18
RAB40ALP0C0E4 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
RAB40ALP0C0E4 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RAB40ALP0C0E4 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC13.94□□□□□ -0.18
RAB40ALP0C0E4 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC13.94□□□□□ -0.18
RAB40ALP0C0E4 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RAB40ALP0C0E4 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RAB40ALP0C0E4 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RAB40ALP0C0E4 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RAB40ALP0C0E4 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
RAB40ALP0C0E4 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
RAB40ALP0C0E4 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
RAB40ALP0C0E4 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RAB40ALP0C0E4 SLC16A6P1-201ENST00000413214 1059 ntBASIC13.94□□□□□ -0.18
RAB40ALP0C0E4 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC13.94□□□□□ -0.18
RAB40ALP0C0E4 SKA2-202ENST00000437036 625 ntTSL 2 BASIC13.94□□□□□ -0.18
RAB40ALP0C0E4 MSRA-203ENST00000441698 788 ntTSL 2 BASIC13.94□□□□□ -0.18
RAB40ALP0C0E4 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC13.94□□□□□ -0.18
RAB40ALP0C0E4 AL035414.1-201ENST00000451327 857 ntBASIC13.94□□□□□ -0.18
RAB40ALP0C0E4 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
RAB40ALP0C0E4 SUPT4H1P2-201ENST00000501248 353 ntBASIC13.94□□□□□ -0.18
RAB40ALP0C0E4 AC024681.1-201ENST00000521917 487 ntBASIC13.94□□□□□ -0.18
RAB40ALP0C0E4 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC13.94□□□□□ -0.18
RAB40ALP0C0E4 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC13.94□□□□□ -0.18
RAB40ALP0C0E4 FOS-206ENST00000555347 1280 ntTSL 2 BASIC13.94□□□□□ -0.18
RAB40ALP0C0E4 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC13.94□□□□□ -0.18
RAB40ALP0C0E4 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC13.94□□□□□ -0.18
RAB40ALP0C0E4 SNORD3B-2-202ENST00000571722 791 ntBASIC13.94□□□□□ -0.18
RAB40ALP0C0E4 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RAB40ALP0C0E4 HCG18-245ENST00000602550 559 ntTSL 4 BASIC13.94□□□□□ -0.18
RAB40ALP0C0E4 AC097724.1-201ENST00000609581 426 ntBASIC13.94□□□□□ -0.18
RAB40ALP0C0E4 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC13.94□□□□□ -0.18
RAB40ALP0C0E4 AL390755.1-201ENST00000623716 2027 ntBASIC13.94□□□□□ -0.18
RAB40ALP0C0E4 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RAB40ALP0C0E4 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RAB40ALP0C0E4 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RAB40ALP0C0E4 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC13.94□□□□□ -0.18
RAB40ALP0C0E4 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC13.94□□□□□ -0.18
RAB40ALP0C0E4 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC13.94□□□□□ -0.18
RAB40ALP0C0E4 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
RAB40ALP0C0E4 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
RAB40ALP0C0E4 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RAB40ALP0C0E4 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RAB40ALP0C0E4 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC13.94□□□□□ -0.18
RAB40ALP0C0E4 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
RAB40ALP0C0E4 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
RAB40ALP0C0E4 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC13.94□□□□□ -0.18
RAB40ALP0C0E4 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RAB40ALP0C0E4 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
RAB40ALP0C0E4 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
RAB40ALP0C0E4 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
RAB40ALP0C0E4 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC13.93□□□□□ -0.18
RAB40ALP0C0E4 AL008718.2-201ENST00000609206 1313 ntBASIC13.93□□□□□ -0.18
RAB40ALP0C0E4 SNX18-202ENST00000343017 3140 ntBASIC13.93□□□□□ -0.18
RAB40ALP0C0E4 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
RAB40ALP0C0E4 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RAB40ALP0C0E4 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
RAB40ALP0C0E4 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RAB40ALP0C0E4 C18orf15-201ENST00000623680 2534 ntBASIC13.93□□□□□ -0.18
RAB40ALP0C0E4 AC023024.2-201ENST00000623561 1993 ntBASIC13.93□□□□□ -0.18
RAB40ALP0C0E4 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RAB40ALP0C0E4 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC13.93□□□□□ -0.18
RAB40ALP0C0E4 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RAB40ALP0C0E4 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
RAB40ALP0C0E4 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RAB40ALP0C0E4 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
RAB40ALP0C0E4 ELK2AP-201ENST00000392510 1007 ntBASIC13.93□□□□□ -0.18
RAB40ALP0C0E4 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms