Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
CXCL1P09341 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
CXCL1P09341 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
CXCL1P09341 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
CXCL1P09341 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
CXCL1P09341 HLA-H-201ENST00000383620 1096 ntBASIC11.51□□□□□ -0.57
CXCL1P09341 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC11.51□□□□□ -0.57
CXCL1P09341 AC136604.1-202ENST00000425471 771 ntBASIC11.51□□□□□ -0.57
CXCL1P09341 AC142381.1-201ENST00000426099 345 ntBASIC11.51□□□□□ -0.57
CXCL1P09341 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC11.51□□□□□ -0.57
CXCL1P09341 ELP6-209ENST00000446787 894 ntTSL 3 BASIC11.51□□□□□ -0.57
CXCL1P09341 AC093909.1-201ENST00000504731 1122 ntBASIC11.51□□□□□ -0.57
CXCL1P09341 KRT19P2-202ENST00000557173 1012 ntBASIC11.51□□□□□ -0.57
CXCL1P09341 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC11.51□□□□□ -0.57
CXCL1P09341 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC11.51□□□□□ -0.57
CXCL1P09341 NT5C-211ENST00000582170 653 ntTSL 3 BASIC11.51□□□□□ -0.57
CXCL1P09341 AL445228.2-201ENST00000605589 952 ntBASIC11.51□□□□□ -0.57
CXCL1P09341 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC11.51□□□□□ -0.57
CXCL1P09341 AC004877.2-201ENST00000623941 599 ntBASIC11.51□□□□□ -0.57
CXCL1P09341 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC11.51□□□□□ -0.57
CXCL1P09341 RRBP1-206ENST00000455029 2485 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
CXCL1P09341 DRD2-210ENST00000544518 2473 ntAPPRIS ALT1 TSL 1 (best) BASIC11.51□□□□□ -0.57
CXCL1P09341 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
CXCL1P09341 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC11.51□□□□□ -0.57
CXCL1P09341 BX255923.2-202ENST00000620833 2874 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
CXCL1P09341 GOLGA7B-203ENST00000596005 6378 ntTSL 2 BASIC11.51□□□□□ -0.57
CXCL1P09341 COPS7B-201ENST00000350033 2544 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
CXCL1P09341 MAP2K4P1-202ENST00000602584 2539 ntTSL 2 BASIC11.51□□□□□ -0.57
CXCL1P09341 AL645937.6-201ENST00000641122 3727 ntBASIC11.51□□□□□ -0.57
CXCL1P09341 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
CXCL1P09341 LARGE1-203ENST00000402320 3955 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
CXCL1P09341 SYNJ2-208ENST00000640338 3959 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
CXCL1P09341 CELF2-216ENST00000637215 2724 ntTSL 5 BASIC11.51□□□□□ -0.57
CXCL1P09341 BCCIP-202ENST00000299130 2337 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
CXCL1P09341 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC11.5□□□□□ -0.57
CXCL1P09341 L3MBTL1-203ENST00000373135 3218 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
CXCL1P09341 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
CXCL1P09341 TP53INP2-202ENST00000374810 4184 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CXCL1P09341 COBLL1-225ENST00000629362 3868 ntAPPRIS ALT2 TSL 2 BASIC11.5□□□□□ -0.57
CXCL1P09341 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
CXCL1P09341 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC11.5□□□□□ -0.57
CXCL1P09341 ILF3-201ENST00000250241 3035 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
CXCL1P09341 ZFAND3-203ENST00000373391 3001 ntTSL 5 BASIC11.5□□□□□ -0.57
CXCL1P09341 SERPINB1-201ENST00000380739 2619 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CXCL1P09341 AL021155.1-201ENST00000438808 2637 ntBASIC11.5□□□□□ -0.57
CXCL1P09341 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
CXCL1P09341 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC11.5□□□□□ -0.57
CXCL1P09341 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
CXCL1P09341 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CXCL1P09341 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
CXCL1P09341 AOC4P-203ENST00000566825 2289 ntBASIC11.5□□□□□ -0.57
CXCL1P09341 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CXCL1P09341 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CXCL1P09341 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
CXCL1P09341 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC11.5□□□□□ -0.57
CXCL1P09341 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC11.5□□□□□ -0.57
CXCL1P09341 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC11.5□□□□□ -0.57
CXCL1P09341 SMN2-210ENST00000511812 867 ntTSL 2 BASIC11.5□□□□□ -0.57
CXCL1P09341 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC11.5□□□□□ -0.57
CXCL1P09341 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CXCL1P09341 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC11.5□□□□□ -0.57
CXCL1P09341 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
CXCL1P09341 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC11.5□□□□□ -0.57
CXCL1P09341 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC11.5□□□□□ -0.57
CXCL1P09341 MTMR11-201ENST00000369140 2324 ntAPPRIS ALT2 TSL 2 BASIC11.5□□□□□ -0.57
CXCL1P09341 NAGK-202ENST00000418807 2343 ntTSL 5 BASIC11.5□□□□□ -0.57
CXCL1P09341 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC11.5□□□□□ -0.57
CXCL1P09341 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
CXCL1P09341 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CXCL1P09341 CCT3-211ENST00000472765 1858 ntTSL 2 BASIC11.5□□□□□ -0.57
CXCL1P09341 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC11.5□□□□□ -0.57
CXCL1P09341 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CXCL1P09341 CCER1-201ENST00000358859 2962 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
CXCL1P09341 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
CXCL1P09341 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
CXCL1P09341 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC11.5□□□□□ -0.57
CXCL1P09341 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC11.5□□□□□ -0.57
CXCL1P09341 USP19-207ENST00000434032 4677 ntAPPRIS ALT2 TSL 2 BASIC11.5□□□□□ -0.57
CXCL1P09341 TRPC7-201ENST00000352189 2241 ntTSL 5 BASIC11.5□□□□□ -0.57
CXCL1P09341 POTEE-201ENST00000356920 4159 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CXCL1P09341 AL157996.1-201ENST00000624684 2299 ntBASIC11.49□□□□□ -0.57
CXCL1P09341 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
CXCL1P09341 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
CXCL1P09341 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CXCL1P09341 PID1-204ENST00000409462 2387 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
CXCL1P09341 PTK2-202ENST00000395218 4415 ntTSL 5 BASIC11.49□□□□□ -0.57
CXCL1P09341 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CXCL1P09341 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC11.49□□□□□ -0.57
CXCL1P09341 IGHG1-202ENST00000390548 2619 ntAPPRIS P5 BASIC11.49□□□□□ -0.57
CXCL1P09341 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CXCL1P09341 AC093899.2-201ENST00000513963 1935 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
CXCL1P09341 SAP30BP-225ENST00000584667 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CXCL1P09341 HSPA2-201ENST00000247207 2767 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
CXCL1P09341 TNFRSF21-201ENST00000296861 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CXCL1P09341 LSM14A-203ENST00000544216 3596 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
CXCL1P09341 TBC1D3P2-203ENST00000581291 2088 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
CXCL1P09341 HERPUD1-204ENST00000439977 2946 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
CXCL1P09341 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CXCL1P09341 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
CXCL1P09341 AL031284.1-201ENST00000419297 478 ntBASIC11.49□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 59.4 ms