Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
COL5A2P05997 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
COL5A2P05997 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
COL5A2P05997 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC18.87■□□□□ 0.61
COL5A2P05997 KCNK9-201ENST00000303015 1245 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
COL5A2P05997 ZNF614-202ENST00000356322 1293 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
COL5A2P05997 PRELID3B-202ENST00000371033 943 ntTSL 2 BASIC18.87■□□□□ 0.61
COL5A2P05997 LST1-204ENST00000376086 554 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
COL5A2P05997 VCX3A-202ENST00000398729 808 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
COL5A2P05997 COPS7B-204ENST00000409091 806 ntTSL 5 BASIC18.87■□□□□ 0.61
COL5A2P05997 AC103702.2-203ENST00000425510 379 ntTSL 5 BASIC18.87■□□□□ 0.61
COL5A2P05997 HORMAD2-AS1-202ENST00000432568 727 ntTSL 3 BASIC18.87■□□□□ 0.61
COL5A2P05997 FABP5P3-202ENST00000477993 1027 ntTSL 5 BASIC18.87■□□□□ 0.61
COL5A2P05997 RN7SL288P-201ENST00000490496 291 ntBASIC18.87■□□□□ 0.61
COL5A2P05997 ALG1L7P-201ENST00000502317 768 ntBASIC18.87■□□□□ 0.61
COL5A2P05997 EHF-208ENST00000530286 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
COL5A2P05997 AP000866.5-201ENST00000531241 445 ntTSL 5 BASIC18.87■□□□□ 0.61
COL5A2P05997 AC087203.1-201ENST00000532111 1181 ntBASIC18.87■□□□□ 0.61
COL5A2P05997 KNOP1P1-201ENST00000542108 989 ntBASIC18.87■□□□□ 0.61
COL5A2P05997 LINC01002-234ENST00000633808 848 ntTSL 5 BASIC18.87■□□□□ 0.61
COL5A2P05997 IQSEC2-207ENST00000638583 722 ntTSL 5 BASIC18.87■□□□□ 0.61
COL5A2P05997 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
COL5A2P05997 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC18.87■□□□□ 0.61
COL5A2P05997 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
COL5A2P05997 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
COL5A2P05997 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
COL5A2P05997 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
COL5A2P05997 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
COL5A2P05997 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
COL5A2P05997 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
COL5A2P05997 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
COL5A2P05997 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
COL5A2P05997 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
COL5A2P05997 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
COL5A2P05997 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
COL5A2P05997 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.86■□□□□ 0.61
COL5A2P05997 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
COL5A2P05997 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC18.86■□□□□ 0.61
COL5A2P05997 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
COL5A2P05997 HIST1H4B-201ENST00000377745 438 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
COL5A2P05997 AC073210.1-201ENST00000414799 232 ntBASIC18.86■□□□□ 0.61
COL5A2P05997 AL157832.2-206ENST00000428178 601 ntTSL 3 BASIC18.86■□□□□ 0.61
COL5A2P05997 HNRNPA1P2-207ENST00000432375 960 ntBASIC18.86■□□□□ 0.61
COL5A2P05997 GNAT1-202ENST00000433068 1224 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
COL5A2P05997 KRT18P62-201ENST00000446618 1287 ntBASIC18.86■□□□□ 0.61
COL5A2P05997 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
COL5A2P05997 IGHEP2-201ENST00000519308 1256 ntBASIC18.86■□□□□ 0.61
COL5A2P05997 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
COL5A2P05997 FKBP4P8-201ENST00000610931 1369 ntBASIC18.86■□□□□ 0.61
COL5A2P05997 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC18.86■□□□□ 0.61
COL5A2P05997 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
COL5A2P05997 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
COL5A2P05997 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC18.86■□□□□ 0.61
COL5A2P05997 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
COL5A2P05997 AC138035.3-201ENST00000622706 2791 ntBASIC18.86■□□□□ 0.61
COL5A2P05997 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
COL5A2P05997 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC18.86■□□□□ 0.61
COL5A2P05997 AC138761.6-201ENST00000583997 1423 ntBASIC18.86■□□□□ 0.61
COL5A2P05997 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC18.86■□□□□ 0.61
COL5A2P05997 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
COL5A2P05997 NCF4-202ENST00000397147 1641 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
COL5A2P05997 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
COL5A2P05997 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
COL5A2P05997 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
COL5A2P05997 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
COL5A2P05997 LCN6-201ENST00000341206 717 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
COL5A2P05997 RPRD2-201ENST00000369067 1043 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
COL5A2P05997 TRAPPC3-201ENST00000373159 590 ntTSL 3 BASIC18.85■□□□□ 0.61
COL5A2P05997 AC092570.1-201ENST00000414446 469 ntBASIC18.85■□□□□ 0.61
COL5A2P05997 OST4-201ENST00000429985 559 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
COL5A2P05997 AL157392.3-204ENST00000440878 397 ntTSL 3 BASIC18.85■□□□□ 0.61
COL5A2P05997 AL713999.1-201ENST00000473363 753 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
COL5A2P05997 S100A2-205ENST00000487430 752 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
COL5A2P05997 SLC25A15P3-201ENST00000505530 290 ntBASIC18.85■□□□□ 0.61
COL5A2P05997 STAT5A-208ENST00000587646 1022 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
COL5A2P05997 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC18.85■□□□□ 0.61
COL5A2P05997 SCGB1B2P-201ENST00000595013 612 ntTSL 2 BASIC18.85■□□□□ 0.61
COL5A2P05997 AL136982.5-201ENST00000605222 294 ntBASIC18.85■□□□□ 0.61
COL5A2P05997 ANXA5-202ENST00000501272 1363 ntTSL 5 BASIC18.85■□□□□ 0.61
COL5A2P05997 PAX6-264ENST00000640125 1375 ntTSL 5 BASIC18.85■□□□□ 0.61
COL5A2P05997 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC18.85■□□□□ 0.61
COL5A2P05997 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
COL5A2P05997 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
COL5A2P05997 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
COL5A2P05997 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC18.85■□□□□ 0.61
COL5A2P05997 BCCIP-203ENST00000368759 1433 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
COL5A2P05997 MKRN2-202ENST00000411987 1436 ntTSL 2 BASIC18.85■□□□□ 0.61
COL5A2P05997 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
COL5A2P05997 AC106707.1-201ENST00000475981 1640 ntTSL 2 BASIC18.85■□□□□ 0.61
COL5A2P05997 ATF4-203ENST00000404241 1910 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
COL5A2P05997 ZEB1-AS1-208ENST00000607166 2503 ntBASIC18.85■□□□□ 0.61
COL5A2P05997 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
COL5A2P05997 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC18.85■□□□□ 0.61
COL5A2P05997 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
COL5A2P05997 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
COL5A2P05997 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
COL5A2P05997 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
COL5A2P05997 AC022080.1-201ENST00000366255 781 ntBASIC18.84■□□□□ 0.61
COL5A2P05997 OR10N1P-201ENST00000392758 869 ntBASIC18.84■□□□□ 0.61
COL5A2P05997 CCDC12-202ENST00000425441 1097 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms