Protein–RNA interactions for Protein: O43924

PDE6D, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, humanhuman

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6DO43924 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
PDE6DO43924 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC11.51□□□□□ -0.57
PDE6DO43924 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC11.51□□□□□ -0.57
PDE6DO43924 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
PDE6DO43924 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC11.51□□□□□ -0.57
PDE6DO43924 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
PDE6DO43924 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
PDE6DO43924 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
PDE6DO43924 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC11.51□□□□□ -0.57
PDE6DO43924 ZC3H18-201ENST00000301011 3729 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
PDE6DO43924 SOGA1-201ENST00000237536 14371 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
PDE6DO43924 SLC25A26-202ENST00000354883 2673 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
PDE6DO43924 PHLDB1-201ENST00000356063 5240 ntAPPRIS ALT2 TSL 2 BASIC11.51□□□□□ -0.57
PDE6DO43924 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC11.51□□□□□ -0.57
PDE6DO43924 AL118506.1-201ENST00000601296 3082 ntBASIC11.51□□□□□ -0.57
PDE6DO43924 ST3GAL2-202ENST00000393640 8872 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
PDE6DO43924 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC11.51□□□□□ -0.57
PDE6DO43924 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
PDE6DO43924 MIR346-201ENST00000362234 95 ntBASIC11.51□□□□□ -0.57
PDE6DO43924 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
PDE6DO43924 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
PDE6DO43924 SPDYE17-201ENST00000412399 783 ntBASIC11.51□□□□□ -0.57
PDE6DO43924 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC11.51□□□□□ -0.57
PDE6DO43924 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC11.51□□□□□ -0.57
PDE6DO43924 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
PDE6DO43924 AC009947.1-201ENST00000444350 727 ntBASIC11.51□□□□□ -0.57
PDE6DO43924 PTK7-212ENST00000476760 902 ntTSL 2 BASIC11.51□□□□□ -0.57
PDE6DO43924 RN7SL589P-201ENST00000481268 310 ntBASIC11.51□□□□□ -0.57
PDE6DO43924 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC11.51□□□□□ -0.57
PDE6DO43924 SMN2-210ENST00000511812 867 ntTSL 2 BASIC11.51□□□□□ -0.57
PDE6DO43924 AL135744.1-201ENST00000565098 629 ntBASIC11.51□□□□□ -0.57
PDE6DO43924 AP000842.3-202ENST00000569238 1080 ntBASIC11.51□□□□□ -0.57
PDE6DO43924 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC11.51□□□□□ -0.57
PDE6DO43924 AP002472.1-201ENST00000577490 586 ntBASIC11.51□□□□□ -0.57
PDE6DO43924 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC11.51□□□□□ -0.57
PDE6DO43924 PCDHGB7-202ENST00000612073 2785 ntAPPRIS ALT2 BASIC11.51□□□□□ -0.57
PDE6DO43924 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
PDE6DO43924 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC11.51□□□□□ -0.57
PDE6DO43924 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
PDE6DO43924 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
PDE6DO43924 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC11.51□□□□□ -0.57
PDE6DO43924 TMC8-201ENST00000318430 4411 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
PDE6DO43924 FIBCD1-202ENST00000372338 3253 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
PDE6DO43924 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
PDE6DO43924 PDE7B-203ENST00000615259 5234 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
PDE6DO43924 LIPE-201ENST00000244289 3813 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
PDE6DO43924 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
PDE6DO43924 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC11.51□□□□□ -0.57
PDE6DO43924 PLEKHG2-206ENST00000458508 3898 ntAPPRIS ALT2 TSL 2 BASIC11.51□□□□□ -0.57
PDE6DO43924 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC11.51□□□□□ -0.57
PDE6DO43924 ESPNL-202ENST00000409169 4441 ntTSL 5 BASIC11.51□□□□□ -0.57
PDE6DO43924 MKRN5P-201ENST00000445263 1467 ntBASIC11.51□□□□□ -0.57
PDE6DO43924 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
PDE6DO43924 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC11.51□□□□□ -0.57
PDE6DO43924 SULF1-202ENST00000402687 4891 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
PDE6DO43924 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
PDE6DO43924 MEST-204ENST00000393187 2380 ntAPPRIS ALT1 TSL 5 BASIC11.5□□□□□ -0.57
PDE6DO43924 CEP131-201ENST00000269392 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
PDE6DO43924 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC11.5□□□□□ -0.57
PDE6DO43924 AL157414.3-201ENST00000624276 1954 ntBASIC11.5□□□□□ -0.57
PDE6DO43924 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
PDE6DO43924 RBM44-201ENST00000316997 4282 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
PDE6DO43924 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC11.5□□□□□ -0.57
PDE6DO43924 NAPB-202ENST00000398425 3824 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
PDE6DO43924 POM121L14P-201ENST00000406100 1558 ntBASIC11.5□□□□□ -0.57
PDE6DO43924 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
PDE6DO43924 AP3S2-216ENST00000617003 1561 ntBASIC11.5□□□□□ -0.57
PDE6DO43924 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
PDE6DO43924 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
PDE6DO43924 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
PDE6DO43924 SPDYE16-203ENST00000633306 2591 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
PDE6DO43924 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC11.5□□□□□ -0.57
PDE6DO43924 POLM-201ENST00000242248 2631 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
PDE6DO43924 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
PDE6DO43924 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
PDE6DO43924 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
PDE6DO43924 RBL1-202ENST00000373664 5684 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
PDE6DO43924 GEM-201ENST00000297596 2208 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
PDE6DO43924 CD300LB-202ENST00000392621 2286 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
PDE6DO43924 SUPT7L-203ENST00000405491 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC11.5□□□□□ -0.57
PDE6DO43924 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC11.5□□□□□ -0.57
PDE6DO43924 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC11.5□□□□□ -0.57
PDE6DO43924 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC11.5□□□□□ -0.57
PDE6DO43924 AL353705.2-201ENST00000428243 662 ntBASIC11.5□□□□□ -0.57
PDE6DO43924 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC11.5□□□□□ -0.57
PDE6DO43924 KRT18P67-201ENST00000432816 1264 ntBASIC11.5□□□□□ -0.57
PDE6DO43924 FAM197Y8-203ENST00000450145 560 ntBASIC11.5□□□□□ -0.57
PDE6DO43924 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC11.5□□□□□ -0.57
PDE6DO43924 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC11.5□□□□□ -0.57
PDE6DO43924 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC11.5□□□□□ -0.57
PDE6DO43924 FAM86C2P-203ENST00000528684 1004 ntBASIC11.5□□□□□ -0.57
PDE6DO43924 AC092364.2-202ENST00000597012 1073 ntBASIC11.5□□□□□ -0.57
PDE6DO43924 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC11.5□□□□□ -0.57
PDE6DO43924 LPCAT2-201ENST00000262134 5391 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
PDE6DO43924 TCF23-201ENST00000296096 4882 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
PDE6DO43924 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
PDE6DO43924 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC11.5□□□□□ -0.57
PDE6DO43924 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC11.5□□□□□ -0.57
PDE6DO43924 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC11.5□□□□□ -0.57
PDE6DO43924 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 193.2 ms