Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
RIPK2O43353 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
RIPK2O43353 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
RIPK2O43353 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC15.05■□□□□ -0
RIPK2O43353 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
RIPK2O43353 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC15.04■□□□□ -0
RIPK2O43353 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RIPK2O43353 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
RIPK2O43353 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC15.04■□□□□ -0
RIPK2O43353 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RIPK2O43353 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC15.04■□□□□ -0
RIPK2O43353 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
RIPK2O43353 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
RIPK2O43353 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RIPK2O43353 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RIPK2O43353 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
RIPK2O43353 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
RIPK2O43353 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC15.04■□□□□ -0
RIPK2O43353 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC15.04■□□□□ -0
RIPK2O43353 VDAC1P7-201ENST00000462417 847 ntBASIC15.04■□□□□ -0
RIPK2O43353 AC112482.1-201ENST00000492080 688 ntBASIC15.04■□□□□ -0
RIPK2O43353 DAD1-205ENST00000543337 501 ntTSL 3 BASIC15.04■□□□□ -0
RIPK2O43353 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC15.04■□□□□ -0
RIPK2O43353 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC15.04■□□□□ -0
RIPK2O43353 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC15.04■□□□□ -0
RIPK2O43353 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC15.04■□□□□ -0
RIPK2O43353 AL671883.3-201ENST00000603274 991 ntBASIC15.04■□□□□ -0
RIPK2O43353 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC15.04■□□□□ -0
RIPK2O43353 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC15.04■□□□□ -0
RIPK2O43353 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC15.04■□□□□ -0
RIPK2O43353 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC15.04■□□□□ -0
RIPK2O43353 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RIPK2O43353 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC15.04■□□□□ -0
RIPK2O43353 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
RIPK2O43353 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC15.04■□□□□ -0
RIPK2O43353 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC15.04■□□□□ -0
RIPK2O43353 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RIPK2O43353 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC15.04■□□□□ -0
RIPK2O43353 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
RIPK2O43353 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RIPK2O43353 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
RIPK2O43353 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC15.04■□□□□ -0
RIPK2O43353 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RIPK2O43353 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC15.04■□□□□ -0
RIPK2O43353 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC15.04■□□□□ -0
RIPK2O43353 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC15.04■□□□□ -0
RIPK2O43353 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RIPK2O43353 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC15.04■□□□□ -0
RIPK2O43353 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC15.04■□□□□ -0
RIPK2O43353 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
RIPK2O43353 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RIPK2O43353 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC15.03■□□□□ -0
RIPK2O43353 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RIPK2O43353 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC15.03■□□□□ -0
RIPK2O43353 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
RIPK2O43353 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC15.03■□□□□ -0
RIPK2O43353 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC15.03■□□□□ -0
RIPK2O43353 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
RIPK2O43353 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC15.03■□□□□ -0
RIPK2O43353 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
RIPK2O43353 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RIPK2O43353 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC15.03■□□□□ -0
RIPK2O43353 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC15.03■□□□□ -0
RIPK2O43353 AC087386.2-201ENST00000623212 4637 ntBASIC15.03■□□□□ -0
RIPK2O43353 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC15.03■□□□□ -0
RIPK2O43353 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC15.03■□□□□ -0
RIPK2O43353 AC083964.2-201ENST00000623988 2396 ntBASIC15.03■□□□□ -0
RIPK2O43353 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC15.03■□□□□ -0
RIPK2O43353 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC15.03■□□□□ -0
RIPK2O43353 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC15.03■□□□□ -0
RIPK2O43353 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC15.03■□□□□ -0
RIPK2O43353 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RIPK2O43353 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RIPK2O43353 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC15.03■□□□□ -0
RIPK2O43353 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
RIPK2O43353 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RIPK2O43353 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
RIPK2O43353 WRB-204ENST00000398753 699 ntTSL 3 BASIC15.03■□□□□ -0
RIPK2O43353 KRT18P13-201ENST00000400056 1290 ntBASIC15.03■□□□□ -0
RIPK2O43353 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC15.03■□□□□ -0
RIPK2O43353 AC069120.2-201ENST00000524091 540 ntBASIC15.03■□□□□ -0
RIPK2O43353 AC109322.1-201ENST00000524499 1264 ntBASIC15.03■□□□□ -0
RIPK2O43353 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC15.03■□□□□ -0
RIPK2O43353 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC15.03■□□□□ -0
RIPK2O43353 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC15.03■□□□□ -0
RIPK2O43353 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC15.03■□□□□ -0
RIPK2O43353 AC036164.1-201ENST00000570544 333 ntBASIC15.03■□□□□ -0
RIPK2O43353 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC15.03■□□□□ -0
RIPK2O43353 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC15.03■□□□□ -0
RIPK2O43353 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RIPK2O43353 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC15.03■□□□□ -0
RIPK2O43353 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC15.03■□□□□ -0
RIPK2O43353 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RIPK2O43353 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RIPK2O43353 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RIPK2O43353 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
RIPK2O43353 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC15.03■□□□□ -0
RIPK2O43353 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RIPK2O43353 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RIPK2O43353 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms