Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC14.83□□□□□ -0.04
PCDHB1Q9Y5F3 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
PCDHB1Q9Y5F3 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC14.82□□□□□ -0.04
PCDHB1Q9Y5F3 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCDHB1Q9Y5F3 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCDHB1Q9Y5F3 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC14.82□□□□□ -0.04
PCDHB1Q9Y5F3 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PCDHB1Q9Y5F3 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PCDHB1Q9Y5F3 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
PCDHB1Q9Y5F3 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PCDHB1Q9Y5F3 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
PCDHB1Q9Y5F3 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCDHB1Q9Y5F3 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
PCDHB1Q9Y5F3 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
PCDHB1Q9Y5F3 AC068418.2-201ENST00000577309 3703 ntBASIC14.82□□□□□ -0.04
PCDHB1Q9Y5F3 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PCDHB1Q9Y5F3 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCDHB1Q9Y5F3 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCDHB1Q9Y5F3 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
PCDHB1Q9Y5F3 MPV17-205ENST00000402310 906 ntTSL 5 BASIC14.82□□□□□ -0.04
PCDHB1Q9Y5F3 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC14.82□□□□□ -0.04
PCDHB1Q9Y5F3 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC14.82□□□□□ -0.04
PCDHB1Q9Y5F3 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
PCDHB1Q9Y5F3 AC091804.1-201ENST00000486888 567 ntBASIC14.82□□□□□ -0.04
PCDHB1Q9Y5F3 MESTP3-201ENST00000503460 968 ntBASIC14.82□□□□□ -0.04
PCDHB1Q9Y5F3 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC14.82□□□□□ -0.04
PCDHB1Q9Y5F3 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC14.82□□□□□ -0.04
PCDHB1Q9Y5F3 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC14.82□□□□□ -0.04
PCDHB1Q9Y5F3 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC14.82□□□□□ -0.04
PCDHB1Q9Y5F3 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC14.82□□□□□ -0.04
PCDHB1Q9Y5F3 AC020914.3-201ENST00000594712 304 ntBASIC14.82□□□□□ -0.04
PCDHB1Q9Y5F3 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC14.82□□□□□ -0.04
PCDHB1Q9Y5F3 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
PCDHB1Q9Y5F3 ECM1P1-201ENST00000604092 1279 ntBASIC14.82□□□□□ -0.04
PCDHB1Q9Y5F3 AC132938.4-201ENST00000623835 848 ntBASIC14.82□□□□□ -0.04
PCDHB1Q9Y5F3 AC006453.4-201ENST00000636949 1252 ntBASIC14.82□□□□□ -0.04
PCDHB1Q9Y5F3 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC14.82□□□□□ -0.04
PCDHB1Q9Y5F3 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC14.82□□□□□ -0.04
PCDHB1Q9Y5F3 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
PCDHB1Q9Y5F3 GOLGA8DP-202ENST00000341390 2184 ntBASIC14.82□□□□□ -0.04
PCDHB1Q9Y5F3 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCDHB1Q9Y5F3 AL138725.1-201ENST00000407347 1314 ntBASIC14.82□□□□□ -0.04
PCDHB1Q9Y5F3 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
PCDHB1Q9Y5F3 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
PCDHB1Q9Y5F3 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC14.82□□□□□ -0.04
PCDHB1Q9Y5F3 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCDHB1Q9Y5F3 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC14.82□□□□□ -0.04
PCDHB1Q9Y5F3 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
PCDHB1Q9Y5F3 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCDHB1Q9Y5F3 AC067750.1-201ENST00000608826 6545 ntBASIC14.82□□□□□ -0.04
PCDHB1Q9Y5F3 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC14.82□□□□□ -0.04
PCDHB1Q9Y5F3 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC14.82□□□□□ -0.04
PCDHB1Q9Y5F3 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PCDHB1Q9Y5F3 AC018735.1-201ENST00000437208 1502 ntBASIC14.82□□□□□ -0.04
PCDHB1Q9Y5F3 AC015818.8-201ENST00000587907 1519 ntBASIC14.82□□□□□ -0.04
PCDHB1Q9Y5F3 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCDHB1Q9Y5F3 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCDHB1Q9Y5F3 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCDHB1Q9Y5F3 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
PCDHB1Q9Y5F3 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC14.81□□□□□ -0.04
PCDHB1Q9Y5F3 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC14.81□□□□□ -0.04
PCDHB1Q9Y5F3 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
PCDHB1Q9Y5F3 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
PCDHB1Q9Y5F3 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
PCDHB1Q9Y5F3 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCDHB1Q9Y5F3 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PCDHB1Q9Y5F3 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCDHB1Q9Y5F3 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC14.81□□□□□ -0.04
PCDHB1Q9Y5F3 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCDHB1Q9Y5F3 HNRNPA1P32-201ENST00000396326 963 ntBASIC14.81□□□□□ -0.04
PCDHB1Q9Y5F3 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
PCDHB1Q9Y5F3 MIR663B-201ENST00000408361 115 ntBASIC14.81□□□□□ -0.04
PCDHB1Q9Y5F3 POM121L8P-201ENST00000417732 1281 ntBASIC14.81□□□□□ -0.04
PCDHB1Q9Y5F3 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCDHB1Q9Y5F3 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PCDHB1Q9Y5F3 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC14.81□□□□□ -0.04
PCDHB1Q9Y5F3 POM121L9P-203ENST00000441984 1285 ntBASIC14.81□□□□□ -0.04
PCDHB1Q9Y5F3 BX284668.4-201ENST00000453917 508 ntBASIC14.81□□□□□ -0.04
PCDHB1Q9Y5F3 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC14.81□□□□□ -0.04
PCDHB1Q9Y5F3 AC105129.2-201ENST00000559536 390 ntBASIC14.81□□□□□ -0.04
PCDHB1Q9Y5F3 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC14.81□□□□□ -0.04
PCDHB1Q9Y5F3 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PCDHB1Q9Y5F3 CYGB-203ENST00000589145 788 ntTSL 3 BASIC14.81□□□□□ -0.04
PCDHB1Q9Y5F3 AC016629.1-201ENST00000596579 586 ntBASIC14.81□□□□□ -0.04
PCDHB1Q9Y5F3 AC004466.1-201ENST00000599515 1080 ntBASIC14.81□□□□□ -0.04
PCDHB1Q9Y5F3 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC14.81□□□□□ -0.04
PCDHB1Q9Y5F3 ETV2-208ENST00000621247 941 ntTSL 5 BASIC14.81□□□□□ -0.04
PCDHB1Q9Y5F3 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCDHB1Q9Y5F3 AL354702.1-201ENST00000442006 1960 ntBASIC14.81□□□□□ -0.04
PCDHB1Q9Y5F3 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCDHB1Q9Y5F3 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC14.81□□□□□ -0.04
PCDHB1Q9Y5F3 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC14.81□□□□□ -0.04
PCDHB1Q9Y5F3 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC14.81□□□□□ -0.04
PCDHB1Q9Y5F3 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PCDHB1Q9Y5F3 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
PCDHB1Q9Y5F3 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCDHB1Q9Y5F3 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PCDHB1Q9Y5F3 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC14.81□□□□□ -0.04
PCDHB1Q9Y5F3 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
PCDHB1Q9Y5F3 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 62.4 ms