Protein–RNA interactions for Protein: Q9Y2S0

POLR1D, DNA-directed RNA polymerases I and III subunit RPAC2, humanhuman

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1DQ9Y2S0 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
POLR1DQ9Y2S0 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC13.32□□□□□ -0.28
POLR1DQ9Y2S0 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
POLR1DQ9Y2S0 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
POLR1DQ9Y2S0 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
POLR1DQ9Y2S0 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC13.32□□□□□ -0.28
POLR1DQ9Y2S0 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
POLR1DQ9Y2S0 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
POLR1DQ9Y2S0 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
POLR1DQ9Y2S0 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
POLR1DQ9Y2S0 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
POLR1DQ9Y2S0 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
POLR1DQ9Y2S0 ABCA17P-202ENST00000469908 4188 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
POLR1DQ9Y2S0 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
POLR1DQ9Y2S0 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC13.32□□□□□ -0.28
POLR1DQ9Y2S0 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
POLR1DQ9Y2S0 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC13.32□□□□□ -0.28
POLR1DQ9Y2S0 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
POLR1DQ9Y2S0 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC13.32□□□□□ -0.28
POLR1DQ9Y2S0 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC13.32□□□□□ -0.28
POLR1DQ9Y2S0 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
POLR1DQ9Y2S0 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
POLR1DQ9Y2S0 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
POLR1DQ9Y2S0 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
POLR1DQ9Y2S0 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
POLR1DQ9Y2S0 AC124283.3-201ENST00000570869 594 ntBASIC13.32□□□□□ -0.28
POLR1DQ9Y2S0 INO80C-206ENST00000586489 594 ntTSL 3 BASIC13.32□□□□□ -0.28
POLR1DQ9Y2S0 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
POLR1DQ9Y2S0 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC13.32□□□□□ -0.28
POLR1DQ9Y2S0 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
POLR1DQ9Y2S0 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
POLR1DQ9Y2S0 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
POLR1DQ9Y2S0 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
POLR1DQ9Y2S0 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
POLR1DQ9Y2S0 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC13.32□□□□□ -0.28
POLR1DQ9Y2S0 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
POLR1DQ9Y2S0 AC055811.4-201ENST00000624039 1754 ntBASIC13.32□□□□□ -0.28
POLR1DQ9Y2S0 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
POLR1DQ9Y2S0 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
POLR1DQ9Y2S0 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC13.32□□□□□ -0.28
POLR1DQ9Y2S0 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
POLR1DQ9Y2S0 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
POLR1DQ9Y2S0 TCF23-201ENST00000296096 4882 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
POLR1DQ9Y2S0 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
POLR1DQ9Y2S0 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
POLR1DQ9Y2S0 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
POLR1DQ9Y2S0 MAGI1-217ENST00000611645 6398 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
POLR1DQ9Y2S0 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC13.31□□□□□ -0.28
POLR1DQ9Y2S0 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC13.31□□□□□ -0.28
POLR1DQ9Y2S0 AC023090.2-201ENST00000625182 2110 ntBASIC13.31□□□□□ -0.28
POLR1DQ9Y2S0 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
POLR1DQ9Y2S0 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
POLR1DQ9Y2S0 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC13.31□□□□□ -0.28
POLR1DQ9Y2S0 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC13.31□□□□□ -0.28
POLR1DQ9Y2S0 SMG9-201ENST00000270066 5510 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
POLR1DQ9Y2S0 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
POLR1DQ9Y2S0 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
POLR1DQ9Y2S0 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
POLR1DQ9Y2S0 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC13.31□□□□□ -0.28
POLR1DQ9Y2S0 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
POLR1DQ9Y2S0 RBL1-202ENST00000373664 5684 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
POLR1DQ9Y2S0 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC13.31□□□□□ -0.28
POLR1DQ9Y2S0 LAMA3-202ENST00000313654 10661 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
POLR1DQ9Y2S0 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
POLR1DQ9Y2S0 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
POLR1DQ9Y2S0 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
POLR1DQ9Y2S0 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
POLR1DQ9Y2S0 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC13.31□□□□□ -0.28
POLR1DQ9Y2S0 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
POLR1DQ9Y2S0 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
POLR1DQ9Y2S0 AL162726.2-201ENST00000438986 1017 ntBASIC13.31□□□□□ -0.28
POLR1DQ9Y2S0 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
POLR1DQ9Y2S0 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC13.31□□□□□ -0.28
POLR1DQ9Y2S0 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC13.31□□□□□ -0.28
POLR1DQ9Y2S0 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
POLR1DQ9Y2S0 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC13.31□□□□□ -0.28
POLR1DQ9Y2S0 LINC02560-201ENST00000596379 459 ntBASIC13.31□□□□□ -0.28
POLR1DQ9Y2S0 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
POLR1DQ9Y2S0 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
POLR1DQ9Y2S0 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC13.31□□□□□ -0.28
POLR1DQ9Y2S0 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC13.31□□□□□ -0.28
POLR1DQ9Y2S0 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
POLR1DQ9Y2S0 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
POLR1DQ9Y2S0 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
POLR1DQ9Y2S0 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
POLR1DQ9Y2S0 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
POLR1DQ9Y2S0 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
POLR1DQ9Y2S0 MIRLET7BHG-201ENST00000360737 4560 ntTSL 2 BASIC13.31□□□□□ -0.28
POLR1DQ9Y2S0 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
POLR1DQ9Y2S0 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC13.31□□□□□ -0.28
POLR1DQ9Y2S0 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
POLR1DQ9Y2S0 DGKD-202ENST00000409813 6228 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
POLR1DQ9Y2S0 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
POLR1DQ9Y2S0 API5-203ENST00000455725 2257 ntTSL 2 BASIC13.3□□□□□ -0.28
POLR1DQ9Y2S0 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC13.3□□□□□ -0.28
POLR1DQ9Y2S0 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
POLR1DQ9Y2S0 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC13.3□□□□□ -0.28
POLR1DQ9Y2S0 ZNF654-204ENST00000636215 6446 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
POLR1DQ9Y2S0 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC13.3□□□□□ -0.28
POLR1DQ9Y2S0 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC13.3□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 60.7 ms