Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
SHANK2Q9UPX8 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC21.38■■□□□ 1.01
SHANK2Q9UPX8 BCAS2P2-201ENST00000425064 674 ntBASIC21.38■■□□□ 1.01
SHANK2Q9UPX8 LINC00866-201ENST00000427379 418 ntTSL 2 BASIC21.38■■□□□ 1.01
SHANK2Q9UPX8 FAM86KP-201ENST00000509817 987 ntBASIC21.38■■□□□ 1.01
SHANK2Q9UPX8 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
SHANK2Q9UPX8 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
SHANK2Q9UPX8 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC21.38■■□□□ 1.01
SHANK2Q9UPX8 HERC2P11-201ENST00000562845 725 ntBASIC21.38■■□□□ 1.01
SHANK2Q9UPX8 AC100756.2-201ENST00000569537 736 ntBASIC21.38■■□□□ 1.01
SHANK2Q9UPX8 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SHANK2Q9UPX8 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
SHANK2Q9UPX8 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
SHANK2Q9UPX8 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
SHANK2Q9UPX8 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SHANK2Q9UPX8 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
SHANK2Q9UPX8 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC21.37■■□□□ 1.01
SHANK2Q9UPX8 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SHANK2Q9UPX8 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC21.37■■□□□ 1.01
SHANK2Q9UPX8 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC21.37■■□□□ 1.01
SHANK2Q9UPX8 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
SHANK2Q9UPX8 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC21.37■■□□□ 1.01
SHANK2Q9UPX8 AC103592.1-201ENST00000394513 664 ntBASIC21.37■■□□□ 1.01
SHANK2Q9UPX8 AC112721.1-201ENST00000409162 588 ntTSL 3 BASIC21.37■■□□□ 1.01
SHANK2Q9UPX8 HCG27-204ENST00000424675 895 ntTSL 3 BASIC21.37■■□□□ 1.01
SHANK2Q9UPX8 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC21.37■■□□□ 1.01
SHANK2Q9UPX8 RN7SL767P-201ENST00000493013 295 ntBASIC21.37■■□□□ 1.01
SHANK2Q9UPX8 AC105390.1-201ENST00000511330 560 ntTSL 4 BASIC21.37■■□□□ 1.01
SHANK2Q9UPX8 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC21.37■■□□□ 1.01
SHANK2Q9UPX8 TP53-221ENST00000615910 1149 ntTSL 5 BASIC21.37■■□□□ 1.01
SHANK2Q9UPX8 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC21.37■■□□□ 1.01
SHANK2Q9UPX8 SLC12A5-219ENST00000628272 401 ntTSL 3 BASIC21.37■■□□□ 1.01
SHANK2Q9UPX8 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
SHANK2Q9UPX8 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
SHANK2Q9UPX8 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
SHANK2Q9UPX8 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
SHANK2Q9UPX8 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
SHANK2Q9UPX8 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC21.36■■□□□ 1.01
SHANK2Q9UPX8 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC21.36■■□□□ 1.01
SHANK2Q9UPX8 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC21.36■■□□□ 1.01
SHANK2Q9UPX8 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC21.36■■□□□ 1.01
SHANK2Q9UPX8 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
SHANK2Q9UPX8 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
SHANK2Q9UPX8 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SHANK2Q9UPX8 IQCJ-201ENST00000397832 1460 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
SHANK2Q9UPX8 IL1F10-202ENST00000393197 1366 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SHANK2Q9UPX8 GOLGA8K-202ENST00000512626 1894 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
SHANK2Q9UPX8 GOLGA8T-202ENST00000569052 1896 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
SHANK2Q9UPX8 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
SHANK2Q9UPX8 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
SHANK2Q9UPX8 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SHANK2Q9UPX8 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC21.36■■□□□ 1.01
SHANK2Q9UPX8 CUTA-203ENST00000374500 937 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
SHANK2Q9UPX8 STK16-203ENST00000409516 895 ntTSL 2 BASIC21.36■■□□□ 1.01
SHANK2Q9UPX8 EHMT2-AS1-201ENST00000434689 373 ntTSL 3 BASIC21.36■■□□□ 1.01
SHANK2Q9UPX8 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
SHANK2Q9UPX8 SLC25A21-203ENST00000555449 1023 ntAPPRIS ALT1 TSL 2 BASIC21.36■■□□□ 1.01
SHANK2Q9UPX8 AP005131.2-201ENST00000589045 487 ntTSL 2 BASIC21.36■■□□□ 1.01
SHANK2Q9UPX8 RPL13A-213ENST00000621674 1098 ntTSL 5 BASIC21.36■■□□□ 1.01
SHANK2Q9UPX8 LINC00431-202ENST00000636375 159 ntBASIC21.36■■□□□ 1.01
SHANK2Q9UPX8 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC21.36■■□□□ 1.01
SHANK2Q9UPX8 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
SHANK2Q9UPX8 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SHANK2Q9UPX8 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC21.36■■□□□ 1.01
SHANK2Q9UPX8 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
SHANK2Q9UPX8 LTF-202ENST00000417439 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
SHANK2Q9UPX8 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC21.36■■□□□ 1.01
SHANK2Q9UPX8 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
SHANK2Q9UPX8 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
SHANK2Q9UPX8 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
SHANK2Q9UPX8 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
SHANK2Q9UPX8 RN7SL832P-201ENST00000607781 1756 ntBASIC21.35■■□□□ 1.01
SHANK2Q9UPX8 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
SHANK2Q9UPX8 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
SHANK2Q9UPX8 GTF3C6-201ENST00000329970 952 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SHANK2Q9UPX8 CSAG1-203ENST00000370291 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
SHANK2Q9UPX8 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC21.35■■□□□ 1.01
SHANK2Q9UPX8 CHTF8-202ENST00000398235 1073 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
SHANK2Q9UPX8 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC21.35■■□□□ 1.01
SHANK2Q9UPX8 AC024293.1-201ENST00000467930 498 ntBASIC21.35■■□□□ 1.01
SHANK2Q9UPX8 AC004889.1-205ENST00000493248 531 ntTSL 4 BASIC21.35■■□□□ 1.01
SHANK2Q9UPX8 OR2A1-AS1-210ENST00000496968 531 ntBASIC21.35■■□□□ 1.01
SHANK2Q9UPX8 AC093826.1-201ENST00000508655 993 ntBASIC21.35■■□□□ 1.01
SHANK2Q9UPX8 AP003390.1-201ENST00000533253 523 ntTSL 5 BASIC21.35■■□□□ 1.01
SHANK2Q9UPX8 AC011247.3-201ENST00000603297 438 ntBASIC21.35■■□□□ 1.01
SHANK2Q9UPX8 AC027559.1-203ENST00000635726 517 ntTSL 5 BASIC21.35■■□□□ 1.01
SHANK2Q9UPX8 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC21.35■■□□□ 1.01
SHANK2Q9UPX8 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SHANK2Q9UPX8 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SHANK2Q9UPX8 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SHANK2Q9UPX8 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC21.35■■□□□ 1.01
SHANK2Q9UPX8 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC21.35■■□□□ 1.01
SHANK2Q9UPX8 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
SHANK2Q9UPX8 ADSL-201ENST00000216194 1620 ntTSL 2 BASIC21.34■■□□□ 1.01
SHANK2Q9UPX8 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC21.34■■□□□ 1.01
SHANK2Q9UPX8 ODCP-201ENST00000459650 1639 ntBASIC21.34■■□□□ 1.01
SHANK2Q9UPX8 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SHANK2Q9UPX8 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
SHANK2Q9UPX8 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC21.34■■□□□ 1.01
SHANK2Q9UPX8 GSN-209ENST00000449733 2702 ntTSL 2 BASIC21.34■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms