Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 MIR3188-201ENST00000583494 85 ntBASIC16.55■□□□□ 0.24
COL20A1Q9P218 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
COL20A1Q9P218 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC16.55■□□□□ 0.24
COL20A1Q9P218 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC16.55■□□□□ 0.24
COL20A1Q9P218 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC16.55■□□□□ 0.24
COL20A1Q9P218 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
COL20A1Q9P218 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
COL20A1Q9P218 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC16.55■□□□□ 0.24
COL20A1Q9P218 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
COL20A1Q9P218 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
COL20A1Q9P218 FES-203ENST00000394302 2133 ntTSL 5 BASIC16.55■□□□□ 0.24
COL20A1Q9P218 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
COL20A1Q9P218 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC16.55■□□□□ 0.24
COL20A1Q9P218 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC16.55■□□□□ 0.24
COL20A1Q9P218 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
COL20A1Q9P218 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
COL20A1Q9P218 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC16.54■□□□□ 0.24
COL20A1Q9P218 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
COL20A1Q9P218 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
COL20A1Q9P218 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC16.54■□□□□ 0.24
COL20A1Q9P218 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
COL20A1Q9P218 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
COL20A1Q9P218 CAP2P1-201ENST00000557743 1390 ntBASIC16.54■□□□□ 0.24
COL20A1Q9P218 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
COL20A1Q9P218 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
COL20A1Q9P218 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
COL20A1Q9P218 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
COL20A1Q9P218 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC16.54■□□□□ 0.24
COL20A1Q9P218 AGGF1P1-201ENST00000509500 2073 ntBASIC16.54■□□□□ 0.24
COL20A1Q9P218 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
COL20A1Q9P218 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
COL20A1Q9P218 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
COL20A1Q9P218 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
COL20A1Q9P218 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
COL20A1Q9P218 ELK2AP-201ENST00000392510 1007 ntBASIC16.54■□□□□ 0.24
COL20A1Q9P218 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
COL20A1Q9P218 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC16.54■□□□□ 0.24
COL20A1Q9P218 HINT2P1-201ENST00000419438 481 ntBASIC16.54■□□□□ 0.24
COL20A1Q9P218 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC16.54■□□□□ 0.24
COL20A1Q9P218 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
COL20A1Q9P218 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
COL20A1Q9P218 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC16.54■□□□□ 0.24
COL20A1Q9P218 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC16.54■□□□□ 0.24
COL20A1Q9P218 PHBP15-201ENST00000574228 665 ntBASIC16.54■□□□□ 0.24
COL20A1Q9P218 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC16.54■□□□□ 0.24
COL20A1Q9P218 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC16.54■□□□□ 0.24
COL20A1Q9P218 AC128714.1-201ENST00000637035 887 ntBASIC16.54■□□□□ 0.24
COL20A1Q9P218 CICP24-201ENST00000605464 2705 ntBASIC16.54■□□□□ 0.24
COL20A1Q9P218 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
COL20A1Q9P218 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC16.54■□□□□ 0.24
COL20A1Q9P218 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC16.54■□□□□ 0.24
COL20A1Q9P218 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC16.54■□□□□ 0.24
COL20A1Q9P218 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
COL20A1Q9P218 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC16.54■□□□□ 0.24
COL20A1Q9P218 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
COL20A1Q9P218 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC16.54■□□□□ 0.24
COL20A1Q9P218 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
COL20A1Q9P218 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC16.54■□□□□ 0.24
COL20A1Q9P218 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
COL20A1Q9P218 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
COL20A1Q9P218 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
COL20A1Q9P218 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
COL20A1Q9P218 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
COL20A1Q9P218 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
COL20A1Q9P218 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
COL20A1Q9P218 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
COL20A1Q9P218 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
COL20A1Q9P218 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
COL20A1Q9P218 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
COL20A1Q9P218 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
COL20A1Q9P218 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
COL20A1Q9P218 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
COL20A1Q9P218 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
COL20A1Q9P218 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
COL20A1Q9P218 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
COL20A1Q9P218 AP002353.1-201ENST00000528257 1599 ntBASIC16.53■□□□□ 0.24
COL20A1Q9P218 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
COL20A1Q9P218 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
COL20A1Q9P218 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
COL20A1Q9P218 MPV17-204ENST00000399052 749 ntTSL 4 BASIC16.53■□□□□ 0.24
COL20A1Q9P218 HLA-DPB2-205ENST00000435074 1188 ntBASIC16.53■□□□□ 0.24
COL20A1Q9P218 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
COL20A1Q9P218 RN7SL67P-201ENST00000492147 296 ntBASIC16.53■□□□□ 0.24
COL20A1Q9P218 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC16.53■□□□□ 0.24
COL20A1Q9P218 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
COL20A1Q9P218 CFL1-214ENST00000534769 758 ntTSL 2 BASIC16.53■□□□□ 0.24
COL20A1Q9P218 MIR4706-201ENST00000582134 82 ntBASIC16.53■□□□□ 0.24
COL20A1Q9P218 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC16.53■□□□□ 0.24
COL20A1Q9P218 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
COL20A1Q9P218 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC16.53■□□□□ 0.24
COL20A1Q9P218 MIR6769A-201ENST00000617340 73 ntBASIC16.53■□□□□ 0.24
COL20A1Q9P218 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
COL20A1Q9P218 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC16.53■□□□□ 0.24
COL20A1Q9P218 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
COL20A1Q9P218 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
COL20A1Q9P218 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC16.53■□□□□ 0.24
COL20A1Q9P218 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
COL20A1Q9P218 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
COL20A1Q9P218 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
COL20A1Q9P218 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms