Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC17.74■□□□□ 0.43
RTN4Q9NQC3 ALDH1L1-202ENST00000393431 2797 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RTN4Q9NQC3 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RTN4Q9NQC3 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RTN4Q9NQC3 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
RTN4Q9NQC3 FES-201ENST00000328850 2829 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RTN4Q9NQC3 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RTN4Q9NQC3 CNKSR3-204ENST00000479339 2023 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RTN4Q9NQC3 PCDHB19P-202ENST00000625133 2914 ntBASIC17.74■□□□□ 0.43
RTN4Q9NQC3 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
RTN4Q9NQC3 UBP1-204ENST00000447368 3669 ntAPPRIS ALT1 TSL 2 BASIC17.74■□□□□ 0.43
RTN4Q9NQC3 EPN2-202ENST00000347697 4664 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
RTN4Q9NQC3 EWSAT1-201ENST00000415504 2214 ntTSL 2 BASIC17.74■□□□□ 0.43
RTN4Q9NQC3 APOBR-201ENST00000431282 3765 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
RTN4Q9NQC3 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RTN4Q9NQC3 CCDC57-205ENST00000392346 2964 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
RTN4Q9NQC3 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RTN4Q9NQC3 MPI-203ENST00000535694 1523 ntTSL 2 BASIC17.73■□□□□ 0.43
RTN4Q9NQC3 AL589702.1-201ENST00000641229 1509 ntBASIC17.73■□□□□ 0.43
RTN4Q9NQC3 DLGAP1-205ENST00000400150 5332 ntTSL 5 BASIC17.73■□□□□ 0.43
RTN4Q9NQC3 CYP4F11-205ENST00000620614 2908 ntTSL 5 BASIC17.73■□□□□ 0.43
RTN4Q9NQC3 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
RTN4Q9NQC3 CENPL-202ENST00000356198 2357 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RTN4Q9NQC3 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC17.73■□□□□ 0.43
RTN4Q9NQC3 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RTN4Q9NQC3 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC17.73■□□□□ 0.43
RTN4Q9NQC3 KRT17P5-202ENST00000444070 2552 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RTN4Q9NQC3 MYO15B-236ENST00000633867 6323 ntTSL 5 BASIC17.73■□□□□ 0.43
RTN4Q9NQC3 HNRNPUL1-207ENST00000595018 2794 ntTSL 2 BASIC17.73■□□□□ 0.43
RTN4Q9NQC3 MEP1A-201ENST00000230588 2892 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RTN4Q9NQC3 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RTN4Q9NQC3 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
RTN4Q9NQC3 RHOQP3-201ENST00000437982 621 ntBASIC17.73■□□□□ 0.43
RTN4Q9NQC3 KRT18P34-201ENST00000488218 1270 ntBASIC17.73■□□□□ 0.43
RTN4Q9NQC3 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC17.73■□□□□ 0.43
RTN4Q9NQC3 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC17.73■□□□□ 0.43
RTN4Q9NQC3 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC17.73■□□□□ 0.43
RTN4Q9NQC3 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
RTN4Q9NQC3 AL049840.3-201ENST00000602669 611 ntBASIC17.73■□□□□ 0.43
RTN4Q9NQC3 AL078644.1-201ENST00000609881 752 ntBASIC17.73■□□□□ 0.43
RTN4Q9NQC3 AP003072.3-201ENST00000623456 594 ntBASIC17.73■□□□□ 0.43
RTN4Q9NQC3 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC17.73■□□□□ 0.43
RTN4Q9NQC3 GEM-201ENST00000297596 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RTN4Q9NQC3 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RTN4Q9NQC3 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC17.73■□□□□ 0.43
RTN4Q9NQC3 TVP23A-201ENST00000299866 3360 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
RTN4Q9NQC3 ZNF287-201ENST00000395824 3373 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RTN4Q9NQC3 DLEU1-231ENST00000490577 2440 ntTSL 5 BASIC17.73■□□□□ 0.43
RTN4Q9NQC3 HCFC2P1-201ENST00000392864 1592 ntBASIC17.73■□□□□ 0.43
RTN4Q9NQC3 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC17.73■□□□□ 0.43
RTN4Q9NQC3 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC17.73■□□□□ 0.43
RTN4Q9NQC3 AC026746.1-203ENST00000513386 1676 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RTN4Q9NQC3 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
RTN4Q9NQC3 CPN2-201ENST00000323830 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RTN4Q9NQC3 TRMT2B-202ENST00000372936 3327 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
RTN4Q9NQC3 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC17.73■□□□□ 0.43
RTN4Q9NQC3 IQUB-202ENST00000466202 3296 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RTN4Q9NQC3 PTGR2-205ENST00000555661 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RTN4Q9NQC3 AC239809.3-201ENST00000599640 4266 ntTSL 5 BASIC17.72■□□□□ 0.43
RTN4Q9NQC3 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC17.72■□□□□ 0.43
RTN4Q9NQC3 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
RTN4Q9NQC3 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC17.72■□□□□ 0.43
RTN4Q9NQC3 LRRC17-201ENST00000249377 2002 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RTN4Q9NQC3 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
RTN4Q9NQC3 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC17.72■□□□□ 0.43
RTN4Q9NQC3 C1S-202ENST00000360817 2635 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RTN4Q9NQC3 HARS-207ENST00000504156 3334 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RTN4Q9NQC3 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RTN4Q9NQC3 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RTN4Q9NQC3 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
RTN4Q9NQC3 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
RTN4Q9NQC3 DLGAP3-202ENST00000373347 3856 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
RTN4Q9NQC3 NEXN-201ENST00000330010 3195 ntTSL 2 BASIC17.72■□□□□ 0.43
RTN4Q9NQC3 SPINT1-201ENST00000344051 3056 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
RTN4Q9NQC3 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC17.72■□□□□ 0.43
RTN4Q9NQC3 AC073439.1-201ENST00000624121 1774 ntBASIC17.72■□□□□ 0.43
RTN4Q9NQC3 LIAS-202ENST00000340169 1485 ntTSL 5 BASIC17.72■□□□□ 0.43
RTN4Q9NQC3 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RTN4Q9NQC3 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
RTN4Q9NQC3 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RTN4Q9NQC3 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RTN4Q9NQC3 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
RTN4Q9NQC3 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC17.72■□□□□ 0.43
RTN4Q9NQC3 HCG4B-203ENST00000450128 991 ntBASIC17.72■□□□□ 0.43
RTN4Q9NQC3 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC17.72■□□□□ 0.43
RTN4Q9NQC3 AL139353.2-202ENST00000502430 1213 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RTN4Q9NQC3 AC009088.1-201ENST00000565152 833 ntBASIC17.72■□□□□ 0.43
RTN4Q9NQC3 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC17.72■□□□□ 0.43
RTN4Q9NQC3 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RTN4Q9NQC3 OR5AR1-201ENST00000624596 1026 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
RTN4Q9NQC3 ALDH7A1-228ENST00000636886 2321 ntTSL 5 BASIC17.72■□□□□ 0.43
RTN4Q9NQC3 PRPSAP1-206ENST00000446526 3660 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RTN4Q9NQC3 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
RTN4Q9NQC3 MAP1S-202ENST00000544059 3399 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
RTN4Q9NQC3 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RTN4Q9NQC3 CACNA1G-214ENST00000505165 6633 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
RTN4Q9NQC3 CACNA1G-220ENST00000507896 6600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
RTN4Q9NQC3 KNDC1-202ENST00000368571 3925 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RTN4Q9NQC3 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RTN4Q9NQC3 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms