Protein–RNA interactions for Protein: Q9BW85

CCDC94, Coiled-coil domain-containing protein 94, humanhuman

Predicted RBP Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC94Q9BW85 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC94Q9BW85 OR8S1-201ENST00000310194 1080 ntBASIC16.87■□□□□ 0.29
CCDC94Q9BW85 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC94Q9BW85 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC16.87■□□□□ 0.29
CCDC94Q9BW85 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC16.87■□□□□ 0.29
CCDC94Q9BW85 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC16.87■□□□□ 0.29
CCDC94Q9BW85 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC16.87■□□□□ 0.29
CCDC94Q9BW85 TMEM14DP-201ENST00000422205 345 ntBASIC16.87■□□□□ 0.29
CCDC94Q9BW85 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC16.87■□□□□ 0.29
CCDC94Q9BW85 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC94Q9BW85 TDH-203ENST00000531764 1110 ntBASIC16.87■□□□□ 0.29
CCDC94Q9BW85 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC16.87■□□□□ 0.29
CCDC94Q9BW85 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC94Q9BW85 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC16.87■□□□□ 0.29
CCDC94Q9BW85 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC16.87■□□□□ 0.29
CCDC94Q9BW85 AC106886.1-201ENST00000568660 600 ntBASIC16.87■□□□□ 0.29
CCDC94Q9BW85 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC16.87■□□□□ 0.29
CCDC94Q9BW85 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC16.87■□□□□ 0.29
CCDC94Q9BW85 AC008735.3-201ENST00000596646 500 ntBASIC16.87■□□□□ 0.29
CCDC94Q9BW85 AL162274.1-201ENST00000617191 1098 ntBASIC16.87■□□□□ 0.29
CCDC94Q9BW85 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC16.87■□□□□ 0.29
CCDC94Q9BW85 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC16.87■□□□□ 0.29
CCDC94Q9BW85 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC94Q9BW85 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC94Q9BW85 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC16.87■□□□□ 0.29
CCDC94Q9BW85 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC94Q9BW85 C7orf57-202ENST00000420324 1957 ntTSL 5 BASIC16.87■□□□□ 0.29
CCDC94Q9BW85 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
CCDC94Q9BW85 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC94Q9BW85 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC94Q9BW85 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC16.87■□□□□ 0.29
CCDC94Q9BW85 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC16.87■□□□□ 0.29
CCDC94Q9BW85 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC94Q9BW85 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC16.87■□□□□ 0.29
CCDC94Q9BW85 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
CCDC94Q9BW85 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC94Q9BW85 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC16.87■□□□□ 0.29
CCDC94Q9BW85 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC16.87■□□□□ 0.29
CCDC94Q9BW85 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC94Q9BW85 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC94Q9BW85 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC94Q9BW85 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC94Q9BW85 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC94Q9BW85 AC131902.2-201ENST00000566892 2172 ntBASIC16.87■□□□□ 0.29
CCDC94Q9BW85 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
CCDC94Q9BW85 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC16.86■□□□□ 0.29
CCDC94Q9BW85 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC94Q9BW85 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC16.86■□□□□ 0.29
CCDC94Q9BW85 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC94Q9BW85 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC94Q9BW85 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC94Q9BW85 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC94Q9BW85 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
CCDC94Q9BW85 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC16.86■□□□□ 0.29
CCDC94Q9BW85 PLCD4-202ENST00000417849 2738 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
CCDC94Q9BW85 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC94Q9BW85 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC94Q9BW85 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC16.86■□□□□ 0.29
CCDC94Q9BW85 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC94Q9BW85 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC16.86■□□□□ 0.29
CCDC94Q9BW85 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC94Q9BW85 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC94Q9BW85 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC94Q9BW85 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
CCDC94Q9BW85 TEX30-203ENST00000376022 828 ntTSL 2 BASIC16.86■□□□□ 0.29
CCDC94Q9BW85 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC94Q9BW85 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
CCDC94Q9BW85 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC16.86■□□□□ 0.29
CCDC94Q9BW85 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC94Q9BW85 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC16.86■□□□□ 0.29
CCDC94Q9BW85 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
CCDC94Q9BW85 AC009486.1-201ENST00000569860 813 ntBASIC16.86■□□□□ 0.29
CCDC94Q9BW85 MIR5189-201ENST00000577370 114 ntBASIC16.86■□□□□ 0.29
CCDC94Q9BW85 APOC4-201ENST00000591600 348 ntTSL 3 BASIC16.86■□□□□ 0.29
CCDC94Q9BW85 METTL26-214ENST00000614890 801 ntTSL 3 BASIC16.86■□□□□ 0.29
CCDC94Q9BW85 RPSAP52-203ENST00000622976 1023 ntBASIC16.86■□□□□ 0.29
CCDC94Q9BW85 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC16.86■□□□□ 0.29
CCDC94Q9BW85 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC16.86■□□□□ 0.29
CCDC94Q9BW85 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC94Q9BW85 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC16.86■□□□□ 0.29
CCDC94Q9BW85 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC94Q9BW85 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC94Q9BW85 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC94Q9BW85 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC94Q9BW85 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC94Q9BW85 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC16.86■□□□□ 0.29
CCDC94Q9BW85 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC94Q9BW85 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
CCDC94Q9BW85 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC94Q9BW85 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
CCDC94Q9BW85 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC94Q9BW85 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC94Q9BW85 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC94Q9BW85 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC94Q9BW85 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC94Q9BW85 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC16.86■□□□□ 0.29
CCDC94Q9BW85 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC94Q9BW85 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC94Q9BW85 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC94Q9BW85 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms