Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 TGFBI-207ENST00000508076 1034 ntTSL 2 BASIC12.29□□□□□ -0.44
CSMD1Q96PZ7 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CSMD1Q96PZ7 C10orf113-201ENST00000529198 614 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
CSMD1Q96PZ7 KNOP1P1-201ENST00000542108 989 ntBASIC12.29□□□□□ -0.44
CSMD1Q96PZ7 PPCDC-206ENST00000564923 757 ntTSL 5 BASIC12.29□□□□□ -0.44
CSMD1Q96PZ7 GACAT2-201ENST00000579368 818 ntTSL 2 BASIC12.29□□□□□ -0.44
CSMD1Q96PZ7 AC010127.1-202ENST00000597623 713 ntTSL 2 BASIC12.29□□□□□ -0.44
CSMD1Q96PZ7 APOBEC3H-207ENST00000613996 465 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CSMD1Q96PZ7 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CSMD1Q96PZ7 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CSMD1Q96PZ7 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CSMD1Q96PZ7 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
CSMD1Q96PZ7 HLA-DQB2-231ENST00000435145 2026 ntBASIC12.29□□□□□ -0.44
CSMD1Q96PZ7 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
CSMD1Q96PZ7 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CSMD1Q96PZ7 TMEM60-201ENST00000257663 1023 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CSMD1Q96PZ7 Z82185.1-201ENST00000417792 549 ntTSL 4 BASIC12.28□□□□□ -0.44
CSMD1Q96PZ7 RGS5-216ENST00000449680 788 ntTSL 3 BASIC12.28□□□□□ -0.44
CSMD1Q96PZ7 RN7SL564P-201ENST00000496309 250 ntBASIC12.28□□□□□ -0.44
CSMD1Q96PZ7 AC008443.1-202ENST00000506340 687 ntTSL 2 BASIC12.28□□□□□ -0.44
CSMD1Q96PZ7 SEPHS2P1-201ENST00000511618 1162 ntBASIC12.28□□□□□ -0.44
CSMD1Q96PZ7 AC078814.4-201ENST00000546650 327 ntBASIC12.28□□□□□ -0.44
CSMD1Q96PZ7 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC12.28□□□□□ -0.44
CSMD1Q96PZ7 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC12.28□□□□□ -0.44
CSMD1Q96PZ7 AC006207.1-201ENST00000637958 562 ntTSL 5 BASIC12.28□□□□□ -0.44
CSMD1Q96PZ7 STX3-207ENST00000633708 3111 ntTSL 5 BASIC12.28□□□□□ -0.44
CSMD1Q96PZ7 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CSMD1Q96PZ7 PTGR1-205ENST00000407693 1407 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CSMD1Q96PZ7 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
CSMD1Q96PZ7 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CSMD1Q96PZ7 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
CSMD1Q96PZ7 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC12.28□□□□□ -0.44
CSMD1Q96PZ7 STRN-202ENST00000379213 2254 ntTSL 5 BASIC12.28□□□□□ -0.44
CSMD1Q96PZ7 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC12.28□□□□□ -0.44
CSMD1Q96PZ7 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CSMD1Q96PZ7 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
CSMD1Q96PZ7 DBNDD2-207ENST00000372722 1202 ntTSL 3 BASIC12.28□□□□□ -0.44
CSMD1Q96PZ7 KCNK15-AS1-202ENST00000427303 528 ntTSL 5 BASIC12.28□□□□□ -0.44
CSMD1Q96PZ7 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC12.28□□□□□ -0.44
CSMD1Q96PZ7 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CSMD1Q96PZ7 AC012593.1-214ENST00000586952 767 ntTSL 5 BASIC12.28□□□□□ -0.44
CSMD1Q96PZ7 LINC01002-234ENST00000633808 848 ntTSL 5 BASIC12.28□□□□□ -0.44
CSMD1Q96PZ7 UBOX5-AS1-201ENST00000446537 1792 ntTSL 2 BASIC12.28□□□□□ -0.44
CSMD1Q96PZ7 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
CSMD1Q96PZ7 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
CSMD1Q96PZ7 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC12.28□□□□□ -0.44
CSMD1Q96PZ7 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC12.28□□□□□ -0.44
CSMD1Q96PZ7 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CSMD1Q96PZ7 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CSMD1Q96PZ7 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC12.28□□□□□ -0.44
CSMD1Q96PZ7 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
CSMD1Q96PZ7 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC12.28□□□□□ -0.44
CSMD1Q96PZ7 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC12.28□□□□□ -0.44
CSMD1Q96PZ7 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC12.28□□□□□ -0.44
CSMD1Q96PZ7 TMEM123-208ENST00000532161 743 ntAPPRIS ALT2 TSL 3 BASIC12.28□□□□□ -0.44
CSMD1Q96PZ7 SNRPF-205ENST00000553192 552 ntTSL 4 BASIC12.28□□□□□ -0.44
CSMD1Q96PZ7 HNRNPA1P16-201ENST00000575692 955 ntBASIC12.28□□□□□ -0.44
CSMD1Q96PZ7 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
CSMD1Q96PZ7 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CSMD1Q96PZ7 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
CSMD1Q96PZ7 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
CSMD1Q96PZ7 CICP23-201ENST00000605013 2741 ntBASIC12.27□□□□□ -0.44
CSMD1Q96PZ7 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC12.27□□□□□ -0.44
CSMD1Q96PZ7 UQCC2-204ENST00000607484 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
CSMD1Q96PZ7 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
CSMD1Q96PZ7 WFDC5-202ENST00000372789 1018 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
CSMD1Q96PZ7 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC12.27□□□□□ -0.44
CSMD1Q96PZ7 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.44
CSMD1Q96PZ7 ATP5J-204ENST00000400093 1179 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
CSMD1Q96PZ7 SAA1-202ENST00000405158 675 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
CSMD1Q96PZ7 AC098934.1-203ENST00000442868 1262 ntBASIC12.27□□□□□ -0.44
CSMD1Q96PZ7 CDK4P1-201ENST00000454213 828 ntBASIC12.27□□□□□ -0.44
CSMD1Q96PZ7 RN7SL23P-201ENST00000484055 275 ntBASIC12.27□□□□□ -0.44
CSMD1Q96PZ7 BID-209ENST00000551952 700 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
CSMD1Q96PZ7 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
CSMD1Q96PZ7 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC12.27□□□□□ -0.44
CSMD1Q96PZ7 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC12.27□□□□□ -0.44
CSMD1Q96PZ7 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC12.27□□□□□ -0.45
CSMD1Q96PZ7 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CSMD1Q96PZ7 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
CSMD1Q96PZ7 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
CSMD1Q96PZ7 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
CSMD1Q96PZ7 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CSMD1Q96PZ7 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC12.27□□□□□ -0.45
CSMD1Q96PZ7 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CSMD1Q96PZ7 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CSMD1Q96PZ7 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CSMD1Q96PZ7 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC12.27□□□□□ -0.45
CSMD1Q96PZ7 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CSMD1Q96PZ7 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CSMD1Q96PZ7 XAGE2-201ENST00000286049 618 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CSMD1Q96PZ7 AC112721.1-201ENST00000409162 588 ntTSL 3 BASIC12.27□□□□□ -0.45
CSMD1Q96PZ7 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC12.27□□□□□ -0.45
CSMD1Q96PZ7 GNG10P1-201ENST00000452289 199 ntBASIC12.27□□□□□ -0.45
CSMD1Q96PZ7 ALG1L3P-201ENST00000503331 765 ntBASIC12.27□□□□□ -0.45
CSMD1Q96PZ7 LINC02063-201ENST00000503415 566 ntTSL 4 BASIC12.27□□□□□ -0.45
CSMD1Q96PZ7 AAMDC-210ENST00000532481 690 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
CSMD1Q96PZ7 IDH3A-213ENST00000559205 566 ntTSL 4 BASIC12.27□□□□□ -0.45
CSMD1Q96PZ7 ZFP36-201ENST00000594045 690 ntTSL 3 BASIC12.27□□□□□ -0.45
CSMD1Q96PZ7 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC12.27□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms