Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SNX27Q96L92 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
SNX27Q96L92 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
SNX27Q96L92 R3HDM2P2-201ENST00000401880 2116 ntBASIC15.91■□□□□ 0.14
SNX27Q96L92 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SNX27Q96L92 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SNX27Q96L92 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
SNX27Q96L92 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SNX27Q96L92 CICP14-201ENST00000629111 2732 ntBASIC15.9■□□□□ 0.14
SNX27Q96L92 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC15.9■□□□□ 0.14
SNX27Q96L92 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC15.9■□□□□ 0.14
SNX27Q96L92 NDUFB11-202ENST00000377811 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SNX27Q96L92 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SNX27Q96L92 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC15.9■□□□□ 0.14
SNX27Q96L92 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
SNX27Q96L92 TMBIM7P-202ENST00000641474 1516 ntBASIC15.9■□□□□ 0.14
SNX27Q96L92 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SNX27Q96L92 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC15.9■□□□□ 0.14
SNX27Q96L92 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC15.9■□□□□ 0.14
SNX27Q96L92 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SNX27Q96L92 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
SNX27Q96L92 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
SNX27Q96L92 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
SNX27Q96L92 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
SNX27Q96L92 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SNX27Q96L92 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SNX27Q96L92 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
SNX27Q96L92 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC15.9■□□□□ 0.14
SNX27Q96L92 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC15.9■□□□□ 0.14
SNX27Q96L92 AC069218.1-201ENST00000435269 762 ntBASIC15.9■□□□□ 0.14
SNX27Q96L92 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SNX27Q96L92 AC006122.1-201ENST00000493323 440 ntBASIC15.9■□□□□ 0.14
SNX27Q96L92 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC15.9■□□□□ 0.14
SNX27Q96L92 FAM192A-218ENST00000567439 1086 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
SNX27Q96L92 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SNX27Q96L92 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC15.9■□□□□ 0.14
SNX27Q96L92 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC15.9■□□□□ 0.14
SNX27Q96L92 AL136295.7-201ENST00000619226 1200 ntBASIC15.9■□□□□ 0.14
SNX27Q96L92 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SNX27Q96L92 USP35-204ENST00000530267 2419 ntTSL 2 BASIC15.9■□□□□ 0.14
SNX27Q96L92 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC15.9■□□□□ 0.14
SNX27Q96L92 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SNX27Q96L92 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
SNX27Q96L92 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SNX27Q96L92 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SNX27Q96L92 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SNX27Q96L92 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC15.9■□□□□ 0.14
SNX27Q96L92 AC006480.2-201ENST00000609770 1337 ntBASIC15.9■□□□□ 0.14
SNX27Q96L92 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
SNX27Q96L92 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SNX27Q96L92 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SNX27Q96L92 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC15.9■□□□□ 0.14
SNX27Q96L92 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
SNX27Q96L92 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SNX27Q96L92 KHSRPP1-201ENST00000427983 1768 ntBASIC15.9■□□□□ 0.14
SNX27Q96L92 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC15.9■□□□□ 0.14
SNX27Q96L92 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SNX27Q96L92 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SNX27Q96L92 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SNX27Q96L92 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SNX27Q96L92 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.14
SNX27Q96L92 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
SNX27Q96L92 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SNX27Q96L92 AC006504.5-208ENST00000588784 2401 ntBASIC15.89■□□□□ 0.13
SNX27Q96L92 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
SNX27Q96L92 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
SNX27Q96L92 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SNX27Q96L92 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
SNX27Q96L92 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC15.89■□□□□ 0.13
SNX27Q96L92 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC15.89■□□□□ 0.13
SNX27Q96L92 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC15.89■□□□□ 0.13
SNX27Q96L92 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
SNX27Q96L92 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
SNX27Q96L92 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC15.89■□□□□ 0.13
SNX27Q96L92 AC136759.1-202ENST00000530858 2194 ntBASIC15.89■□□□□ 0.13
SNX27Q96L92 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
SNX27Q96L92 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SNX27Q96L92 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SNX27Q96L92 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SNX27Q96L92 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SNX27Q96L92 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC15.89■□□□□ 0.13
SNX27Q96L92 AC009093.10-201ENST00000641956 1442 ntBASIC15.89■□□□□ 0.13
SNX27Q96L92 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SNX27Q96L92 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SNX27Q96L92 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SNX27Q96L92 AC011742.3-201ENST00000439053 820 ntBASIC15.89■□□□□ 0.13
SNX27Q96L92 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC15.89■□□□□ 0.13
SNX27Q96L92 RN7SL720P-201ENST00000488178 304 ntBASIC15.89■□□□□ 0.13
SNX27Q96L92 AC010234.1-201ENST00000494599 870 ntBASIC15.89■□□□□ 0.13
SNX27Q96L92 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC15.89■□□□□ 0.13
SNX27Q96L92 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC15.89■□□□□ 0.13
SNX27Q96L92 AL132994.2-201ENST00000603120 687 ntBASIC15.89■□□□□ 0.13
SNX27Q96L92 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC15.89■□□□□ 0.13
SNX27Q96L92 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC15.89■□□□□ 0.13
SNX27Q96L92 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC15.89■□□□□ 0.13
SNX27Q96L92 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SNX27Q96L92 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SNX27Q96L92 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
SNX27Q96L92 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
SNX27Q96L92 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms