Protein–RNA interactions for Protein: Q96EP0

RNF31, E3 ubiquitin-protein ligase RNF31, humanhuman

Predictions only

Length 1,072 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF31Q96EP0 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
RNF31Q96EP0 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RNF31Q96EP0 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RNF31Q96EP0 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
RNF31Q96EP0 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
RNF31Q96EP0 NKAIN1P1-201ENST00000435754 582 ntBASIC14.36□□□□□ -0.11
RNF31Q96EP0 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC14.36□□□□□ -0.11
RNF31Q96EP0 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RNF31Q96EP0 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC14.36□□□□□ -0.11
RNF31Q96EP0 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC14.36□□□□□ -0.11
RNF31Q96EP0 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC14.36□□□□□ -0.11
RNF31Q96EP0 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC14.36□□□□□ -0.11
RNF31Q96EP0 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC14.36□□□□□ -0.11
RNF31Q96EP0 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
RNF31Q96EP0 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
RNF31Q96EP0 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC14.36□□□□□ -0.11
RNF31Q96EP0 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC14.36□□□□□ -0.11
RNF31Q96EP0 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC14.36□□□□□ -0.11
RNF31Q96EP0 AC023024.2-201ENST00000623561 1993 ntBASIC14.36□□□□□ -0.11
RNF31Q96EP0 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RNF31Q96EP0 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
RNF31Q96EP0 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
RNF31Q96EP0 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RNF31Q96EP0 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RNF31Q96EP0 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC14.36□□□□□ -0.11
RNF31Q96EP0 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC14.36□□□□□ -0.11
RNF31Q96EP0 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC14.36□□□□□ -0.11
RNF31Q96EP0 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RNF31Q96EP0 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC14.36□□□□□ -0.11
RNF31Q96EP0 CICP23-201ENST00000605013 2741 ntBASIC14.35□□□□□ -0.11
RNF31Q96EP0 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RNF31Q96EP0 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RNF31Q96EP0 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
RNF31Q96EP0 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RNF31Q96EP0 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC14.35□□□□□ -0.11
RNF31Q96EP0 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
RNF31Q96EP0 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
RNF31Q96EP0 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
RNF31Q96EP0 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
RNF31Q96EP0 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC14.35□□□□□ -0.11
RNF31Q96EP0 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
RNF31Q96EP0 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RNF31Q96EP0 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC14.35□□□□□ -0.11
RNF31Q96EP0 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RNF31Q96EP0 ANKRD30BP2-201ENST00000435744 1610 ntBASIC14.35□□□□□ -0.11
RNF31Q96EP0 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
RNF31Q96EP0 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
RNF31Q96EP0 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RNF31Q96EP0 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC14.35□□□□□ -0.11
RNF31Q96EP0 LSM5-207ENST00000410044 687 ntTSL 3 BASIC14.35□□□□□ -0.11
RNF31Q96EP0 SLC25A24P2-201ENST00000415059 510 ntBASIC14.35□□□□□ -0.11
RNF31Q96EP0 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC14.35□□□□□ -0.11
RNF31Q96EP0 NUS1P3-201ENST00000423502 862 ntBASIC14.35□□□□□ -0.11
RNF31Q96EP0 GHSR-202ENST00000427970 912 ntBASIC14.35□□□□□ -0.11
RNF31Q96EP0 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC14.35□□□□□ -0.11
RNF31Q96EP0 HSPB1P2-201ENST00000448722 546 ntBASIC14.35□□□□□ -0.11
RNF31Q96EP0 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC14.35□□□□□ -0.11
RNF31Q96EP0 AC100850.1-201ENST00000506768 649 ntBASIC14.35□□□□□ -0.11
RNF31Q96EP0 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC14.35□□□□□ -0.11
RNF31Q96EP0 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
RNF31Q96EP0 AC106820.3-201ENST00000561653 397 ntBASIC14.35□□□□□ -0.11
RNF31Q96EP0 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC14.35□□□□□ -0.11
RNF31Q96EP0 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC14.35□□□□□ -0.11
RNF31Q96EP0 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC14.35□□□□□ -0.11
RNF31Q96EP0 KC6-205ENST00000599934 556 ntTSL 4 BASIC14.35□□□□□ -0.11
RNF31Q96EP0 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
RNF31Q96EP0 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RNF31Q96EP0 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
RNF31Q96EP0 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC14.35□□□□□ -0.11
RNF31Q96EP0 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RNF31Q96EP0 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
RNF31Q96EP0 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
RNF31Q96EP0 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
RNF31Q96EP0 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RNF31Q96EP0 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
RNF31Q96EP0 REXO1L2P-201ENST00000425429 2069 ntBASIC14.35□□□□□ -0.11
RNF31Q96EP0 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
RNF31Q96EP0 FKBP4P6-201ENST00000457486 1332 ntBASIC14.35□□□□□ -0.11
RNF31Q96EP0 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RNF31Q96EP0 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RNF31Q96EP0 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RNF31Q96EP0 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
RNF31Q96EP0 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RNF31Q96EP0 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RNF31Q96EP0 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RNF31Q96EP0 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC14.34□□□□□ -0.11
RNF31Q96EP0 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC14.34□□□□□ -0.11
RNF31Q96EP0 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC14.34□□□□□ -0.11
RNF31Q96EP0 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
RNF31Q96EP0 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RNF31Q96EP0 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RNF31Q96EP0 AC005912.2-201ENST00000619492 2400 ntBASIC14.34□□□□□ -0.11
RNF31Q96EP0 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RNF31Q96EP0 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC14.34□□□□□ -0.11
RNF31Q96EP0 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC14.34□□□□□ -0.11
RNF31Q96EP0 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RNF31Q96EP0 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RNF31Q96EP0 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
RNF31Q96EP0 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC14.34□□□□□ -0.11
RNF31Q96EP0 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms