Protein–RNA interactions for Protein: Q6P9F0

CCDC62, Coiled-coil domain-containing protein 62, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC62Q6P9F0 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC62Q6P9F0 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC62Q6P9F0 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC62Q6P9F0 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC16.61■□□□□ 0.25
CCDC62Q6P9F0 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC16.61■□□□□ 0.25
CCDC62Q6P9F0 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
CCDC62Q6P9F0 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
CCDC62Q6P9F0 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC62Q6P9F0 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC62Q6P9F0 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC62Q6P9F0 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
CCDC62Q6P9F0 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC62Q6P9F0 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC62Q6P9F0 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC62Q6P9F0 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC62Q6P9F0 AC099063.4-201ENST00000641099 1602 ntBASIC16.6■□□□□ 0.25
CCDC62Q6P9F0 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC62Q6P9F0 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC16.6■□□□□ 0.25
CCDC62Q6P9F0 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC62Q6P9F0 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC62Q6P9F0 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC16.6■□□□□ 0.25
CCDC62Q6P9F0 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC62Q6P9F0 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC62Q6P9F0 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC62Q6P9F0 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC62Q6P9F0 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC62Q6P9F0 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC62Q6P9F0 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC16.6■□□□□ 0.25
CCDC62Q6P9F0 AC073150.1-201ENST00000450406 1084 ntBASIC16.6■□□□□ 0.25
CCDC62Q6P9F0 AL353637.1-201ENST00000451571 732 ntBASIC16.6■□□□□ 0.25
CCDC62Q6P9F0 AC006122.1-201ENST00000493323 440 ntBASIC16.6■□□□□ 0.25
CCDC62Q6P9F0 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC62Q6P9F0 AC242376.1-201ENST00000559033 726 ntBASIC16.6■□□□□ 0.25
CCDC62Q6P9F0 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC16.6■□□□□ 0.25
CCDC62Q6P9F0 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
CCDC62Q6P9F0 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
CCDC62Q6P9F0 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC62Q6P9F0 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC16.6■□□□□ 0.25
CCDC62Q6P9F0 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC16.6■□□□□ 0.25
CCDC62Q6P9F0 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC62Q6P9F0 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC62Q6P9F0 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC16.6■□□□□ 0.25
CCDC62Q6P9F0 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC62Q6P9F0 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC62Q6P9F0 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC16.6■□□□□ 0.25
CCDC62Q6P9F0 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC62Q6P9F0 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC62Q6P9F0 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC62Q6P9F0 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC62Q6P9F0 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC16.6■□□□□ 0.25
CCDC62Q6P9F0 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
CCDC62Q6P9F0 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC62Q6P9F0 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC62Q6P9F0 AC138035.3-201ENST00000622706 2791 ntBASIC16.6■□□□□ 0.25
CCDC62Q6P9F0 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC62Q6P9F0 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC62Q6P9F0 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC62Q6P9F0 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC16.59■□□□□ 0.25
CCDC62Q6P9F0 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC16.59■□□□□ 0.25
CCDC62Q6P9F0 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC62Q6P9F0 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC62Q6P9F0 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC16.59■□□□□ 0.25
CCDC62Q6P9F0 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC62Q6P9F0 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC16.59■□□□□ 0.25
CCDC62Q6P9F0 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
CCDC62Q6P9F0 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC16.59■□□□□ 0.25
CCDC62Q6P9F0 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC16.59■□□□□ 0.25
CCDC62Q6P9F0 EEF1DP6-201ENST00000449232 372 ntBASIC16.59■□□□□ 0.25
CCDC62Q6P9F0 AC234782.1-201ENST00000451950 919 ntBASIC16.59■□□□□ 0.25
CCDC62Q6P9F0 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC62Q6P9F0 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC16.59■□□□□ 0.25
CCDC62Q6P9F0 TMEM198B-204ENST00000484016 896 ntBASIC16.59■□□□□ 0.25
CCDC62Q6P9F0 AC116345.2-201ENST00000512837 523 ntBASIC16.59■□□□□ 0.25
CCDC62Q6P9F0 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC16.59■□□□□ 0.25
CCDC62Q6P9F0 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC16.59■□□□□ 0.25
CCDC62Q6P9F0 PRKXP1-201ENST00000561423 1122 ntBASIC16.59■□□□□ 0.25
CCDC62Q6P9F0 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC16.59■□□□□ 0.25
CCDC62Q6P9F0 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC16.59■□□□□ 0.25
CCDC62Q6P9F0 MIR4722-201ENST00000578292 60 ntBASIC16.59■□□□□ 0.25
CCDC62Q6P9F0 MIR4754-201ENST00000582477 89 ntBASIC16.59■□□□□ 0.25
CCDC62Q6P9F0 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
CCDC62Q6P9F0 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC16.59■□□□□ 0.25
CCDC62Q6P9F0 MVK-217ENST00000639206 367 ntTSL 5 BASIC16.59■□□□□ 0.25
CCDC62Q6P9F0 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
CCDC62Q6P9F0 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC62Q6P9F0 API5-203ENST00000455725 2257 ntTSL 2 BASIC16.59■□□□□ 0.25
CCDC62Q6P9F0 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC62Q6P9F0 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC16.59■□□□□ 0.25
CCDC62Q6P9F0 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC62Q6P9F0 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC16.59■□□□□ 0.25
CCDC62Q6P9F0 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC62Q6P9F0 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
CCDC62Q6P9F0 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC62Q6P9F0 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC16.59■□□□□ 0.25
CCDC62Q6P9F0 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC62Q6P9F0 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC16.59■□□□□ 0.25
CCDC62Q6P9F0 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
CCDC62Q6P9F0 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CCDC62Q6P9F0 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC16.58■□□□□ 0.25
CCDC62Q6P9F0 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms