Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LPCAT4Q643R3 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LPCAT4Q643R3 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC13.99□□□□□ -0.17
LPCAT4Q643R3 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
LPCAT4Q643R3 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LPCAT4Q643R3 AL135744.1-201ENST00000565098 629 ntBASIC13.99□□□□□ -0.17
LPCAT4Q643R3 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
LPCAT4Q643R3 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
LPCAT4Q643R3 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC13.99□□□□□ -0.17
LPCAT4Q643R3 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC13.99□□□□□ -0.17
LPCAT4Q643R3 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC13.99□□□□□ -0.17
LPCAT4Q643R3 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
LPCAT4Q643R3 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
LPCAT4Q643R3 GFPT2-201ENST00000253778 3093 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LPCAT4Q643R3 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC13.99□□□□□ -0.17
LPCAT4Q643R3 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
LPCAT4Q643R3 SLC38A1-204ENST00000546893 2332 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LPCAT4Q643R3 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
LPCAT4Q643R3 AP3S2-216ENST00000617003 1561 ntBASIC13.99□□□□□ -0.17
LPCAT4Q643R3 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC13.99□□□□□ -0.17
LPCAT4Q643R3 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
LPCAT4Q643R3 TMEM121B-202ENST00000399875 3961 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
LPCAT4Q643R3 POC5-202ENST00000428202 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LPCAT4Q643R3 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
LPCAT4Q643R3 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
LPCAT4Q643R3 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
LPCAT4Q643R3 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC13.99□□□□□ -0.17
LPCAT4Q643R3 ZBTB20-206ENST00000464560 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LPCAT4Q643R3 SERBP1-204ENST00000370995 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
LPCAT4Q643R3 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC13.99□□□□□ -0.17
LPCAT4Q643R3 FAM187A-201ENST00000331733 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LPCAT4Q643R3 CCDC103-204ENST00000417826 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LPCAT4Q643R3 SNX12-202ENST00000374274 2376 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
LPCAT4Q643R3 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC13.98□□□□□ -0.17
LPCAT4Q643R3 PRPF40B-209ENST00000548825 3307 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
LPCAT4Q643R3 MEG3-213ENST00000455531 4867 ntTSL 2 BASIC13.98□□□□□ -0.17
LPCAT4Q643R3 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
LPCAT4Q643R3 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LPCAT4Q643R3 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC13.98□□□□□ -0.17
LPCAT4Q643R3 PEG13-201ENST00000631594 5667 ntBASIC13.98□□□□□ -0.17
LPCAT4Q643R3 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC13.98□□□□□ -0.17
LPCAT4Q643R3 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LPCAT4Q643R3 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
LPCAT4Q643R3 SPTBN2-210ENST00000611817 2890 ntTSL 2 BASIC13.98□□□□□ -0.17
LPCAT4Q643R3 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
LPCAT4Q643R3 ADAMTSL2-201ENST00000354484 4068 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LPCAT4Q643R3 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
LPCAT4Q643R3 LINC00567-201ENST00000569854 3409 ntBASIC13.98□□□□□ -0.17
LPCAT4Q643R3 NSF-201ENST00000398238 3983 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LPCAT4Q643R3 AC138969.2-201ENST00000532739 9932 ntBASIC13.98□□□□□ -0.17
LPCAT4Q643R3 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC13.98□□□□□ -0.17
LPCAT4Q643R3 AMDHD2-202ENST00000302956 3273 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LPCAT4Q643R3 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LPCAT4Q643R3 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
LPCAT4Q643R3 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
LPCAT4Q643R3 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
LPCAT4Q643R3 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
LPCAT4Q643R3 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
LPCAT4Q643R3 MIR346-201ENST00000362234 95 ntBASIC13.98□□□□□ -0.17
LPCAT4Q643R3 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LPCAT4Q643R3 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
LPCAT4Q643R3 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
LPCAT4Q643R3 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC13.98□□□□□ -0.17
LPCAT4Q643R3 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LPCAT4Q643R3 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LPCAT4Q643R3 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC13.98□□□□□ -0.17
LPCAT4Q643R3 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC13.98□□□□□ -0.17
LPCAT4Q643R3 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LPCAT4Q643R3 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LPCAT4Q643R3 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
LPCAT4Q643R3 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
LPCAT4Q643R3 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC13.98□□□□□ -0.17
LPCAT4Q643R3 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC13.98□□□□□ -0.17
LPCAT4Q643R3 AP000842.3-202ENST00000569238 1080 ntBASIC13.98□□□□□ -0.17
LPCAT4Q643R3 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
LPCAT4Q643R3 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LPCAT4Q643R3 HSD17B4-201ENST00000256216 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LPCAT4Q643R3 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LPCAT4Q643R3 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LPCAT4Q643R3 FBRSL1-205ENST00000542061 3175 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
LPCAT4Q643R3 NLRP2-204ENST00000391721 3420 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
LPCAT4Q643R3 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
LPCAT4Q643R3 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
LPCAT4Q643R3 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LPCAT4Q643R3 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LPCAT4Q643R3 TRIT1-202ENST00000372818 2034 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LPCAT4Q643R3 IRF2BPL-201ENST00000238647 4157 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
LPCAT4Q643R3 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
LPCAT4Q643R3 PTK2-202ENST00000395218 4415 ntTSL 5 BASIC13.98□□□□□ -0.17
LPCAT4Q643R3 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LPCAT4Q643R3 C17orf53-203ENST00000585683 2529 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
LPCAT4Q643R3 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LPCAT4Q643R3 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC13.98□□□□□ -0.17
LPCAT4Q643R3 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LPCAT4Q643R3 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LPCAT4Q643R3 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC13.98□□□□□ -0.17
LPCAT4Q643R3 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC13.98□□□□□ -0.17
LPCAT4Q643R3 ZNF426-204ENST00000593003 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
LPCAT4Q643R3 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC13.98□□□□□ -0.17
LPCAT4Q643R3 HTR5A-201ENST00000287907 2912 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms