Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC12.94□□□□□ -0.34
ATPAF1Q5TC12 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ATPAF1Q5TC12 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
ATPAF1Q5TC12 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
ATPAF1Q5TC12 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ATPAF1Q5TC12 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC12.94□□□□□ -0.34
ATPAF1Q5TC12 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ATPAF1Q5TC12 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ATPAF1Q5TC12 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ATPAF1Q5TC12 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ATPAF1Q5TC12 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ATPAF1Q5TC12 METTL26-204ENST00000397665 558 ntTSL 2 BASIC12.94□□□□□ -0.34
ATPAF1Q5TC12 AC104457.1-201ENST00000401024 814 ntBASIC12.94□□□□□ -0.34
ATPAF1Q5TC12 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ATPAF1Q5TC12 CRB3P1-201ENST00000449338 276 ntBASIC12.94□□□□□ -0.34
ATPAF1Q5TC12 PFN2-205ENST00000461868 613 ntTSL 2 BASIC12.94□□□□□ -0.34
ATPAF1Q5TC12 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
ATPAF1Q5TC12 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC12.94□□□□□ -0.34
ATPAF1Q5TC12 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC12.94□□□□□ -0.34
ATPAF1Q5TC12 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
ATPAF1Q5TC12 AC092552.1-201ENST00000547243 906 ntBASIC12.94□□□□□ -0.34
ATPAF1Q5TC12 AC140912.1-201ENST00000577171 1054 ntBASIC12.94□□□□□ -0.34
ATPAF1Q5TC12 SPDYE22P-201ENST00000582158 798 ntBASIC12.94□□□□□ -0.34
ATPAF1Q5TC12 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC12.94□□□□□ -0.34
ATPAF1Q5TC12 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC12.94□□□□□ -0.34
ATPAF1Q5TC12 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC12.94□□□□□ -0.34
ATPAF1Q5TC12 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC12.94□□□□□ -0.34
ATPAF1Q5TC12 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC12.94□□□□□ -0.34
ATPAF1Q5TC12 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
ATPAF1Q5TC12 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
ATPAF1Q5TC12 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
ATPAF1Q5TC12 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
ATPAF1Q5TC12 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ATPAF1Q5TC12 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
ATPAF1Q5TC12 DRD5P1-201ENST00000456605 1438 ntBASIC12.94□□□□□ -0.34
ATPAF1Q5TC12 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
ATPAF1Q5TC12 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
ATPAF1Q5TC12 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
ATPAF1Q5TC12 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
ATPAF1Q5TC12 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
ATPAF1Q5TC12 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
ATPAF1Q5TC12 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
ATPAF1Q5TC12 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
ATPAF1Q5TC12 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC12.94□□□□□ -0.34
ATPAF1Q5TC12 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
ATPAF1Q5TC12 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ATPAF1Q5TC12 AMT-232ENST00000636199 1546 ntTSL 5 BASIC12.93□□□□□ -0.34
ATPAF1Q5TC12 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ATPAF1Q5TC12 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ATPAF1Q5TC12 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ATPAF1Q5TC12 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ATPAF1Q5TC12 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC12.93□□□□□ -0.34
ATPAF1Q5TC12 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ATPAF1Q5TC12 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC12.93□□□□□ -0.34
ATPAF1Q5TC12 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
ATPAF1Q5TC12 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ATPAF1Q5TC12 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
ATPAF1Q5TC12 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
ATPAF1Q5TC12 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
ATPAF1Q5TC12 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
ATPAF1Q5TC12 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC12.93□□□□□ -0.34
ATPAF1Q5TC12 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC12.93□□□□□ -0.34
ATPAF1Q5TC12 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ATPAF1Q5TC12 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
ATPAF1Q5TC12 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
ATPAF1Q5TC12 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC12.93□□□□□ -0.34
ATPAF1Q5TC12 MYCLP2-201ENST00000449268 967 ntBASIC12.93□□□□□ -0.34
ATPAF1Q5TC12 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC12.93□□□□□ -0.34
ATPAF1Q5TC12 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC12.93□□□□□ -0.34
ATPAF1Q5TC12 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC12.93□□□□□ -0.34
ATPAF1Q5TC12 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC12.93□□□□□ -0.34
ATPAF1Q5TC12 AC190387.1-201ENST00000551683 408 ntBASIC12.93□□□□□ -0.34
ATPAF1Q5TC12 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC12.93□□□□□ -0.34
ATPAF1Q5TC12 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC12.93□□□□□ -0.34
ATPAF1Q5TC12 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC12.93□□□□□ -0.34
ATPAF1Q5TC12 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
ATPAF1Q5TC12 AC027307.3-201ENST00000594262 1100 ntBASIC12.93□□□□□ -0.34
ATPAF1Q5TC12 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC12.93□□□□□ -0.34
ATPAF1Q5TC12 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC12.93□□□□□ -0.34
ATPAF1Q5TC12 AC093813.1-201ENST00000605066 256 ntBASIC12.93□□□□□ -0.34
ATPAF1Q5TC12 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC12.93□□□□□ -0.34
ATPAF1Q5TC12 MIR8072-201ENST00000614241 80 ntBASIC12.93□□□□□ -0.34
ATPAF1Q5TC12 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ATPAF1Q5TC12 AC023090.2-201ENST00000625182 2110 ntBASIC12.93□□□□□ -0.34
ATPAF1Q5TC12 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC12.93□□□□□ -0.34
ATPAF1Q5TC12 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ATPAF1Q5TC12 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
ATPAF1Q5TC12 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC12.93□□□□□ -0.34
ATPAF1Q5TC12 AC055811.4-201ENST00000624039 1754 ntBASIC12.93□□□□□ -0.34
ATPAF1Q5TC12 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
ATPAF1Q5TC12 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC12.93□□□□□ -0.34
ATPAF1Q5TC12 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC12.93□□□□□ -0.34
ATPAF1Q5TC12 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
ATPAF1Q5TC12 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ATPAF1Q5TC12 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
ATPAF1Q5TC12 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ATPAF1Q5TC12 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ATPAF1Q5TC12 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC12.93□□□□□ -0.34
ATPAF1Q5TC12 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC12.93□□□□□ -0.34
ATPAF1Q5TC12 GALC-206ENST00000544807 2528 ntTSL 2 BASIC12.93□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 59.4 ms