Protein–RNA interactions for Protein: Q49MI3

CERKL, Ceramide kinase-like protein, humanhuman

Predicted RBP Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CERKLQ49MI3 FRMPD2B-201ENST00000431305 1347 ntBASIC17.2■□□□□ 0.34
CERKLQ49MI3 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
CERKLQ49MI3 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CERKLQ49MI3 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC17.19■□□□□ 0.34
CERKLQ49MI3 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CERKLQ49MI3 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CERKLQ49MI3 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC17.19■□□□□ 0.34
CERKLQ49MI3 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
CERKLQ49MI3 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
CERKLQ49MI3 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
CERKLQ49MI3 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CERKLQ49MI3 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CERKLQ49MI3 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
CERKLQ49MI3 NORAD-201ENST00000565493 5339 ntBASIC17.19■□□□□ 0.34
CERKLQ49MI3 LINC01165-201ENST00000445190 1623 ntBASIC17.19■□□□□ 0.34
CERKLQ49MI3 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CERKLQ49MI3 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CERKLQ49MI3 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
CERKLQ49MI3 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC17.19■□□□□ 0.34
CERKLQ49MI3 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CERKLQ49MI3 LBH-202ENST00000401506 485 ntTSL 3 BASIC17.19■□□□□ 0.34
CERKLQ49MI3 RN7SL258P-201ENST00000478664 300 ntBASIC17.19■□□□□ 0.34
CERKLQ49MI3 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC17.19■□□□□ 0.34
CERKLQ49MI3 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC17.19■□□□□ 0.34
CERKLQ49MI3 IGHVIII-5-2-201ENST00000522505 261 ntBASIC17.19■□□□□ 0.34
CERKLQ49MI3 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CERKLQ49MI3 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CERKLQ49MI3 AC026803.1-201ENST00000569130 274 ntBASIC17.19■□□□□ 0.34
CERKLQ49MI3 MIR4706-201ENST00000582134 82 ntBASIC17.19■□□□□ 0.34
CERKLQ49MI3 MIR3188-201ENST00000583494 85 ntBASIC17.19■□□□□ 0.34
CERKLQ49MI3 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
CERKLQ49MI3 MEG3_2.1-201ENST00000611456 105 ntBASIC17.19■□□□□ 0.34
CERKLQ49MI3 MIR6769A-201ENST00000617340 73 ntBASIC17.19■□□□□ 0.34
CERKLQ49MI3 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
CERKLQ49MI3 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
CERKLQ49MI3 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CERKLQ49MI3 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC17.19■□□□□ 0.34
CERKLQ49MI3 KHSRPP1-201ENST00000427983 1768 ntBASIC17.19■□□□□ 0.34
CERKLQ49MI3 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC17.19■□□□□ 0.34
CERKLQ49MI3 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
CERKLQ49MI3 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
CERKLQ49MI3 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC17.19■□□□□ 0.34
CERKLQ49MI3 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CERKLQ49MI3 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CERKLQ49MI3 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CERKLQ49MI3 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CERKLQ49MI3 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
CERKLQ49MI3 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC17.19■□□□□ 0.34
CERKLQ49MI3 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CERKLQ49MI3 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CERKLQ49MI3 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC17.19■□□□□ 0.34
CERKLQ49MI3 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC17.19■□□□□ 0.34
CERKLQ49MI3 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CERKLQ49MI3 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CERKLQ49MI3 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CERKLQ49MI3 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CERKLQ49MI3 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CERKLQ49MI3 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
CERKLQ49MI3 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
CERKLQ49MI3 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CERKLQ49MI3 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
CERKLQ49MI3 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC17.18■□□□□ 0.34
CERKLQ49MI3 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CERKLQ49MI3 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC17.18■□□□□ 0.34
CERKLQ49MI3 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CERKLQ49MI3 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
CERKLQ49MI3 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
CERKLQ49MI3 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CERKLQ49MI3 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CERKLQ49MI3 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CERKLQ49MI3 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC17.18■□□□□ 0.34
CERKLQ49MI3 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC17.18■□□□□ 0.34
CERKLQ49MI3 AC008723.1-201ENST00000506922 207 ntBASIC17.18■□□□□ 0.34
CERKLQ49MI3 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
CERKLQ49MI3 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
CERKLQ49MI3 STUB1-204ENST00000564370 875 ntTSL 2 BASIC17.18■□□□□ 0.34
CERKLQ49MI3 AL109837.1-201ENST00000603272 613 ntBASIC17.18■□□□□ 0.34
CERKLQ49MI3 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC17.18■□□□□ 0.34
CERKLQ49MI3 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC17.18■□□□□ 0.34
CERKLQ49MI3 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CERKLQ49MI3 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC17.18■□□□□ 0.34
CERKLQ49MI3 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CERKLQ49MI3 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC17.18■□□□□ 0.34
CERKLQ49MI3 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CERKLQ49MI3 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
CERKLQ49MI3 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
CERKLQ49MI3 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CERKLQ49MI3 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC17.18■□□□□ 0.34
CERKLQ49MI3 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC17.18■□□□□ 0.34
CERKLQ49MI3 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
CERKLQ49MI3 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CERKLQ49MI3 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CERKLQ49MI3 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CERKLQ49MI3 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CERKLQ49MI3 AC015909.3-201ENST00000572855 1794 ntBASIC17.17■□□□□ 0.34
CERKLQ49MI3 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CERKLQ49MI3 AC018529.2-202ENST00000611482 3087 ntBASIC17.17■□□□□ 0.34
CERKLQ49MI3 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CERKLQ49MI3 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CERKLQ49MI3 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms