Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC17.72■□□□□ 0.43
RFX7Q2KHR2 RPL35-206ENST00000629845 340 ntTSL 5 BASIC17.72■□□□□ 0.43
RFX7Q2KHR2 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
RFX7Q2KHR2 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RFX7Q2KHR2 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RFX7Q2KHR2 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC17.72■□□□□ 0.43
RFX7Q2KHR2 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RFX7Q2KHR2 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC17.72■□□□□ 0.43
RFX7Q2KHR2 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RFX7Q2KHR2 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RFX7Q2KHR2 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RFX7Q2KHR2 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RFX7Q2KHR2 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
RFX7Q2KHR2 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
RFX7Q2KHR2 R3HDM2P2-201ENST00000401880 2116 ntBASIC17.71■□□□□ 0.43
RFX7Q2KHR2 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC17.71■□□□□ 0.43
RFX7Q2KHR2 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
RFX7Q2KHR2 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
RFX7Q2KHR2 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RFX7Q2KHR2 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
RFX7Q2KHR2 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RFX7Q2KHR2 MBLAC2-202ENST00000514906 1936 ntBASIC17.71■□□□□ 0.43
RFX7Q2KHR2 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
RFX7Q2KHR2 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RFX7Q2KHR2 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
RFX7Q2KHR2 AL008718.2-201ENST00000609206 1313 ntBASIC17.71■□□□□ 0.43
RFX7Q2KHR2 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RFX7Q2KHR2 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC17.71■□□□□ 0.43
RFX7Q2KHR2 ELK2AP-201ENST00000392510 1007 ntBASIC17.71■□□□□ 0.43
RFX7Q2KHR2 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RFX7Q2KHR2 PARVG-202ENST00000415224 999 ntTSL 2 BASIC17.71■□□□□ 0.43
RFX7Q2KHR2 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC17.71■□□□□ 0.43
RFX7Q2KHR2 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC17.71■□□□□ 0.43
RFX7Q2KHR2 ISCA2P1-201ENST00000425548 448 ntBASIC17.71■□□□□ 0.43
RFX7Q2KHR2 PDIA3P2-201ENST00000428073 158 ntBASIC17.71■□□□□ 0.43
RFX7Q2KHR2 FAM58BP-201ENST00000439056 645 ntBASIC17.71■□□□□ 0.43
RFX7Q2KHR2 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC17.71■□□□□ 0.43
RFX7Q2KHR2 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC17.71■□□□□ 0.43
RFX7Q2KHR2 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC17.71■□□□□ 0.43
RFX7Q2KHR2 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC17.71■□□□□ 0.43
RFX7Q2KHR2 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC17.71■□□□□ 0.43
RFX7Q2KHR2 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC17.71■□□□□ 0.43
RFX7Q2KHR2 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC17.71■□□□□ 0.43
RFX7Q2KHR2 MIR6720-201ENST00000611664 98 ntBASIC17.71■□□□□ 0.43
RFX7Q2KHR2 CU633904.3-201ENST00000624042 1029 ntBASIC17.71■□□□□ 0.43
RFX7Q2KHR2 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RFX7Q2KHR2 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RFX7Q2KHR2 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
RFX7Q2KHR2 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RFX7Q2KHR2 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RFX7Q2KHR2 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RFX7Q2KHR2 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC17.71■□□□□ 0.43
RFX7Q2KHR2 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RFX7Q2KHR2 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RFX7Q2KHR2 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
RFX7Q2KHR2 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RFX7Q2KHR2 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC17.71■□□□□ 0.43
RFX7Q2KHR2 AMT-239ENST00000636865 1914 ntTSL 5 BASIC17.71■□□□□ 0.43
RFX7Q2KHR2 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
RFX7Q2KHR2 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
RFX7Q2KHR2 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
RFX7Q2KHR2 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RFX7Q2KHR2 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC17.7■□□□□ 0.42
RFX7Q2KHR2 GOLGA8VP-201ENST00000559009 1798 ntBASIC17.7■□□□□ 0.42
RFX7Q2KHR2 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
RFX7Q2KHR2 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RFX7Q2KHR2 HPD-204ENST00000543163 1709 ntTSL 5 BASIC17.7■□□□□ 0.42
RFX7Q2KHR2 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RFX7Q2KHR2 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC17.7■□□□□ 0.42
RFX7Q2KHR2 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC17.7■□□□□ 0.42
RFX7Q2KHR2 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RFX7Q2KHR2 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RFX7Q2KHR2 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RFX7Q2KHR2 AC152010.1-201ENST00000415779 2006 ntBASIC17.7■□□□□ 0.42
RFX7Q2KHR2 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
RFX7Q2KHR2 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RFX7Q2KHR2 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
RFX7Q2KHR2 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RFX7Q2KHR2 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RFX7Q2KHR2 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RFX7Q2KHR2 HNRNPA1P27-201ENST00000412087 955 ntBASIC17.7■□□□□ 0.42
RFX7Q2KHR2 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC17.7■□□□□ 0.42
RFX7Q2KHR2 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC17.7■□□□□ 0.42
RFX7Q2KHR2 RCC2P8-201ENST00000502779 1035 ntBASIC17.7■□□□□ 0.42
RFX7Q2KHR2 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC17.7■□□□□ 0.42
RFX7Q2KHR2 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC17.7■□□□□ 0.42
RFX7Q2KHR2 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RFX7Q2KHR2 AC104506.1-201ENST00000609247 429 ntBASIC17.7■□□□□ 0.42
RFX7Q2KHR2 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
RFX7Q2KHR2 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC17.7■□□□□ 0.42
RFX7Q2KHR2 AC079336.7-201ENST00000623428 1078 ntBASIC17.7■□□□□ 0.42
RFX7Q2KHR2 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC17.7■□□□□ 0.42
RFX7Q2KHR2 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RFX7Q2KHR2 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
RFX7Q2KHR2 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RFX7Q2KHR2 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RFX7Q2KHR2 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RFX7Q2KHR2 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC17.7■□□□□ 0.42
RFX7Q2KHR2 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RFX7Q2KHR2 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms