Protein–RNA interactions for Protein: Q15906

VPS72, Vacuolar protein sorting-associated protein 72 homolog, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72Q15906 AL512324.3-201ENST00000619383 882 ntBASIC18.82■□□□□ 0.6
VPS72Q15906 HIST1H3B-201ENST00000621411 411 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
VPS72Q15906 AC126755.5-201ENST00000622756 267 ntBASIC18.82■□□□□ 0.6
VPS72Q15906 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
VPS72Q15906 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC18.82■□□□□ 0.6
VPS72Q15906 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
VPS72Q15906 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
VPS72Q15906 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
VPS72Q15906 AP005117.1-202ENST00000581724 1908 ntBASIC18.82■□□□□ 0.6
VPS72Q15906 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
VPS72Q15906 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
VPS72Q15906 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
VPS72Q15906 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
VPS72Q15906 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
VPS72Q15906 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
VPS72Q15906 PRL-201ENST00000306482 1354 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
VPS72Q15906 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC18.81■□□□□ 0.6
VPS72Q15906 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
VPS72Q15906 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC18.81■□□□□ 0.6
VPS72Q15906 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
VPS72Q15906 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
VPS72Q15906 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC18.81■□□□□ 0.6
VPS72Q15906 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
VPS72Q15906 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
VPS72Q15906 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
VPS72Q15906 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
VPS72Q15906 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
VPS72Q15906 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
VPS72Q15906 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
VPS72Q15906 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC18.81■□□□□ 0.6
VPS72Q15906 PHACTR1-203ENST00000379335 943 ntTSL 2 BASIC18.81■□□□□ 0.6
VPS72Q15906 LINC01656-201ENST00000415702 630 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
VPS72Q15906 AP001628.2-201ENST00000420273 784 ntTSL 2 BASIC18.81■□□□□ 0.6
VPS72Q15906 AL773545.2-201ENST00000442149 472 ntBASIC18.81■□□□□ 0.6
VPS72Q15906 ALG1L15P-201ENST00000482834 794 ntBASIC18.81■□□□□ 0.6
VPS72Q15906 SOX2-OT-209ENST00000485035 561 ntTSL 4 BASIC18.81■□□□□ 0.6
VPS72Q15906 AC093300.1-201ENST00000510368 1201 ntBASIC18.81■□□□□ 0.6
VPS72Q15906 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC18.81■□□□□ 0.6
VPS72Q15906 USP32P3-202ENST00000583574 611 ntTSL 3 BASIC18.81■□□□□ 0.6
VPS72Q15906 SOX2-OT-222ENST00000595084 853 ntTSL 5 BASIC18.81■□□□□ 0.6
VPS72Q15906 SOX2-OT-232ENST00000600386 792 ntTSL 5 BASIC18.81■□□□□ 0.6
VPS72Q15906 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
VPS72Q15906 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
VPS72Q15906 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC18.81■□□□□ 0.6
VPS72Q15906 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC18.81■□□□□ 0.6
VPS72Q15906 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC18.81■□□□□ 0.6
VPS72Q15906 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
VPS72Q15906 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
VPS72Q15906 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.81■□□□□ 0.6
VPS72Q15906 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC18.81■□□□□ 0.6
VPS72Q15906 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
VPS72Q15906 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
VPS72Q15906 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
VPS72Q15906 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
VPS72Q15906 AC023024.2-201ENST00000623561 1993 ntBASIC18.81■□□□□ 0.6
VPS72Q15906 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC18.81■□□□□ 0.6
VPS72Q15906 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
VPS72Q15906 AC138932.1-201ENST00000534164 6830 ntBASIC18.8■□□□□ 0.6
VPS72Q15906 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
VPS72Q15906 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
VPS72Q15906 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
VPS72Q15906 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
VPS72Q15906 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
VPS72Q15906 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
VPS72Q15906 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC18.8■□□□□ 0.6
VPS72Q15906 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
VPS72Q15906 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC18.8■□□□□ 0.6
VPS72Q15906 AIFM1-203ENST00000346424 1200 ntTSL 2 BASIC18.8■□□□□ 0.6
VPS72Q15906 HMGCLL1-203ENST00000370850 1171 ntTSL 2 BASIC18.8■□□□□ 0.6
VPS72Q15906 TSC22D3-202ENST00000372382 1216 ntTSL 3 BASIC18.8■□□□□ 0.6
VPS72Q15906 CASP2-203ENST00000392925 616 ntTSL 3 BASIC18.8■□□□□ 0.6
VPS72Q15906 PYM1-203ENST00000408946 1226 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
VPS72Q15906 AL359853.1-202ENST00000415218 544 ntTSL 2 BASIC18.8■□□□□ 0.6
VPS72Q15906 FRGCA-201ENST00000424933 422 ntTSL 3 BASIC18.8■□□□□ 0.6
VPS72Q15906 AL353658.1-201ENST00000436263 789 ntTSL 2 BASIC18.8■□□□□ 0.6
VPS72Q15906 CMPK1-204ENST00000450808 950 ntTSL 2 BASIC18.8■□□□□ 0.6
VPS72Q15906 NDUFA3-214ENST00000485876 963 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
VPS72Q15906 LY6E-215ENST00000523847 427 ntTSL 3 BASIC18.8■□□□□ 0.6
VPS72Q15906 RN7SL605P-201ENST00000577229 281 ntBASIC18.8■□□□□ 0.6
VPS72Q15906 LINC01029-202ENST00000578833 366 ntTSL 3 BASIC18.8■□□□□ 0.6
VPS72Q15906 AP001094.3-201ENST00000580491 616 ntTSL 2 BASIC18.8■□□□□ 0.6
VPS72Q15906 AP000356.3-203ENST00000614808 601 ntTSL 3 BASIC18.8■□□□□ 0.6
VPS72Q15906 AC026336.4-201ENST00000624565 1050 ntBASIC18.8■□□□□ 0.6
VPS72Q15906 OR2T11-201ENST00000625105 1072 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
VPS72Q15906 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
VPS72Q15906 AC005332.8-201ENST00000622750 2735 ntBASIC18.8■□□□□ 0.6
VPS72Q15906 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
VPS72Q15906 PTGR1-205ENST00000407693 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
VPS72Q15906 CERCAM-214ENST00000613052 1429 ntTSL 5 BASIC18.8■□□□□ 0.6
VPS72Q15906 AC117503.4-201ENST00000623229 1418 ntBASIC18.8■□□□□ 0.6
VPS72Q15906 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
VPS72Q15906 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
VPS72Q15906 PAX6-264ENST00000640125 1375 ntTSL 5 BASIC18.8■□□□□ 0.6
VPS72Q15906 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
VPS72Q15906 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
VPS72Q15906 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
VPS72Q15906 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
VPS72Q15906 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
VPS72Q15906 CYP2T1P-202ENST00000641596 2535 ntBASIC18.79■□□□□ 0.6
VPS72Q15906 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms