Protein–RNA interactions for Protein: Q0VF96

CGNL1, Cingulin-like protein 1, humanhuman

Predictions only

Length 1,302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGNL1Q0VF96 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
CGNL1Q0VF96 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC19.95■□□□□ 0.78
CGNL1Q0VF96 AL161670.2-201ENST00000557650 1227 ntBASIC19.95■□□□□ 0.78
CGNL1Q0VF96 AL157813.1-201ENST00000612996 587 ntBASIC19.95■□□□□ 0.78
CGNL1Q0VF96 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC19.95■□□□□ 0.78
CGNL1Q0VF96 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
CGNL1Q0VF96 DDX5-235ENST00000630471 473 ntTSL 4 BASIC19.95■□□□□ 0.78
CGNL1Q0VF96 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CGNL1Q0VF96 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC19.95■□□□□ 0.78
CGNL1Q0VF96 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC19.95■□□□□ 0.78
CGNL1Q0VF96 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC19.95■□□□□ 0.78
CGNL1Q0VF96 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC19.95■□□□□ 0.78
CGNL1Q0VF96 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC19.95■□□□□ 0.78
CGNL1Q0VF96 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC19.95■□□□□ 0.78
CGNL1Q0VF96 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CGNL1Q0VF96 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CGNL1Q0VF96 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CGNL1Q0VF96 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC19.95■□□□□ 0.78
CGNL1Q0VF96 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CGNL1Q0VF96 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CGNL1Q0VF96 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
CGNL1Q0VF96 AC068587.6-202ENST00000641839 5619 ntBASIC19.94■□□□□ 0.78
CGNL1Q0VF96 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
CGNL1Q0VF96 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
CGNL1Q0VF96 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
CGNL1Q0VF96 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CGNL1Q0VF96 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CGNL1Q0VF96 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
CGNL1Q0VF96 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
CGNL1Q0VF96 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC19.94■□□□□ 0.78
CGNL1Q0VF96 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CGNL1Q0VF96 FAM45BP-202ENST00000592932 1624 ntBASIC19.94■□□□□ 0.78
CGNL1Q0VF96 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CGNL1Q0VF96 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CGNL1Q0VF96 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
CGNL1Q0VF96 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CGNL1Q0VF96 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC19.94■□□□□ 0.78
CGNL1Q0VF96 XBP1P1-201ENST00000436573 652 ntBASIC19.94■□□□□ 0.78
CGNL1Q0VF96 MSRA-203ENST00000441698 788 ntTSL 2 BASIC19.94■□□□□ 0.78
CGNL1Q0VF96 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC19.94■□□□□ 0.78
CGNL1Q0VF96 CCNC-217ENST00000523985 958 ntTSL 2 BASIC19.94■□□□□ 0.78
CGNL1Q0VF96 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC19.94■□□□□ 0.78
CGNL1Q0VF96 AC027237.1-201ENST00000560942 655 ntBASIC19.94■□□□□ 0.78
CGNL1Q0VF96 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC19.94■□□□□ 0.78
CGNL1Q0VF96 NAP1L6-202ENST00000641404 1222 ntBASIC19.94■□□□□ 0.78
CGNL1Q0VF96 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CGNL1Q0VF96 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CGNL1Q0VF96 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
CGNL1Q0VF96 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CGNL1Q0VF96 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CGNL1Q0VF96 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
CGNL1Q0VF96 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CGNL1Q0VF96 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CGNL1Q0VF96 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
CGNL1Q0VF96 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CGNL1Q0VF96 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
CGNL1Q0VF96 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC19.93■□□□□ 0.78
CGNL1Q0VF96 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC19.93■□□□□ 0.78
CGNL1Q0VF96 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC19.93■□□□□ 0.78
CGNL1Q0VF96 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC19.93■□□□□ 0.78
CGNL1Q0VF96 AC018629.1-201ENST00000623381 1736 ntBASIC19.93■□□□□ 0.78
CGNL1Q0VF96 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
CGNL1Q0VF96 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC19.93■□□□□ 0.78
CGNL1Q0VF96 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC19.93■□□□□ 0.78
CGNL1Q0VF96 Z97180.1-201ENST00000445173 988 ntBASIC19.93■□□□□ 0.78
CGNL1Q0VF96 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CGNL1Q0VF96 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC19.93■□□□□ 0.78
CGNL1Q0VF96 AC003686.1-201ENST00000550956 1034 ntBASIC19.93■□□□□ 0.78
CGNL1Q0VF96 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC19.93■□□□□ 0.78
CGNL1Q0VF96 RN7SL574P-201ENST00000581512 297 ntBASIC19.93■□□□□ 0.78
CGNL1Q0VF96 MIR4706-201ENST00000582134 82 ntBASIC19.93■□□□□ 0.78
CGNL1Q0VF96 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC19.93■□□□□ 0.78
CGNL1Q0VF96 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC19.93■□□□□ 0.78
CGNL1Q0VF96 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC19.93■□□□□ 0.78
CGNL1Q0VF96 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CGNL1Q0VF96 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC19.93■□□□□ 0.78
CGNL1Q0VF96 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC19.93■□□□□ 0.78
CGNL1Q0VF96 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CGNL1Q0VF96 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CGNL1Q0VF96 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
CGNL1Q0VF96 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CGNL1Q0VF96 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
CGNL1Q0VF96 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CGNL1Q0VF96 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CGNL1Q0VF96 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CGNL1Q0VF96 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CGNL1Q0VF96 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC19.92■□□□□ 0.78
CGNL1Q0VF96 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
CGNL1Q0VF96 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC19.92■□□□□ 0.78
CGNL1Q0VF96 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC19.92■□□□□ 0.78
CGNL1Q0VF96 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CGNL1Q0VF96 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC19.92■□□□□ 0.78
CGNL1Q0VF96 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
CGNL1Q0VF96 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CGNL1Q0VF96 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CGNL1Q0VF96 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CGNL1Q0VF96 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CGNL1Q0VF96 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CGNL1Q0VF96 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC19.92■□□□□ 0.78
CGNL1Q0VF96 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC19.92■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms