Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SMSP52788 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC13.97□□□□□ -0.17
SMSP52788 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC13.97□□□□□ -0.17
SMSP52788 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
SMSP52788 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
SMSP52788 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
SMSP52788 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SMSP52788 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC13.97□□□□□ -0.17
SMSP52788 SF1-209ENST00000433274 2317 ntTSL 2 BASIC13.97□□□□□ -0.17
SMSP52788 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SMSP52788 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SMSP52788 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC13.97□□□□□ -0.17
SMSP52788 AC007787.1-201ENST00000588095 1583 ntBASIC13.97□□□□□ -0.17
SMSP52788 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SMSP52788 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SMSP52788 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC13.97□□□□□ -0.17
SMSP52788 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
SMSP52788 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SMSP52788 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
SMSP52788 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
SMSP52788 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SMSP52788 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC13.97□□□□□ -0.17
SMSP52788 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SMSP52788 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SMSP52788 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC13.97□□□□□ -0.17
SMSP52788 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC13.97□□□□□ -0.17
SMSP52788 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC13.97□□□□□ -0.17
SMSP52788 AC012441.1-201ENST00000446669 685 ntBASIC13.97□□□□□ -0.17
SMSP52788 AC099548.2-209ENST00000480264 625 ntBASIC13.97□□□□□ -0.17
SMSP52788 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC13.97□□□□□ -0.17
SMSP52788 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC13.97□□□□□ -0.17
SMSP52788 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SMSP52788 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC13.97□□□□□ -0.17
SMSP52788 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SMSP52788 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
SMSP52788 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
SMSP52788 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC13.97□□□□□ -0.17
SMSP52788 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SMSP52788 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SMSP52788 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
SMSP52788 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC13.97□□□□□ -0.17
SMSP52788 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SMSP52788 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC13.97□□□□□ -0.17
SMSP52788 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SMSP52788 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SMSP52788 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC13.96□□□□□ -0.17
SMSP52788 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC13.96□□□□□ -0.17
SMSP52788 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SMSP52788 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SMSP52788 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
SMSP52788 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC13.96□□□□□ -0.17
SMSP52788 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.17
SMSP52788 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SMSP52788 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC13.96□□□□□ -0.17
SMSP52788 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
SMSP52788 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
SMSP52788 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
SMSP52788 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SMSP52788 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SMSP52788 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SMSP52788 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SMSP52788 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
SMSP52788 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SMSP52788 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
SMSP52788 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SMSP52788 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SMSP52788 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
SMSP52788 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
SMSP52788 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
SMSP52788 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SMSP52788 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
SMSP52788 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
SMSP52788 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC13.96□□□□□ -0.17
SMSP52788 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC13.96□□□□□ -0.17
SMSP52788 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SMSP52788 VDAC1P7-201ENST00000462417 847 ntBASIC13.96□□□□□ -0.17
SMSP52788 FTH1P14-201ENST00000482930 551 ntBASIC13.96□□□□□ -0.17
SMSP52788 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
SMSP52788 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC13.96□□□□□ -0.17
SMSP52788 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SMSP52788 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SMSP52788 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC13.96□□□□□ -0.17
SMSP52788 AC023310.1-201ENST00000554836 735 ntBASIC13.96□□□□□ -0.17
SMSP52788 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC13.96□□□□□ -0.17
SMSP52788 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SMSP52788 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
SMSP52788 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC13.96□□□□□ -0.17
SMSP52788 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC13.96□□□□□ -0.17
SMSP52788 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC13.96□□□□□ -0.17
SMSP52788 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC13.96□□□□□ -0.17
SMSP52788 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
SMSP52788 UBL5-208ENST00000593087 320 ntTSL 3 BASIC13.96□□□□□ -0.17
SMSP52788 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC13.96□□□□□ -0.17
SMSP52788 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SMSP52788 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SMSP52788 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC13.96□□□□□ -0.17
SMSP52788 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
SMSP52788 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC13.96□□□□□ -0.17
SMSP52788 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC13.96□□□□□ -0.17
SMSP52788 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC13.96□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms