Protein–RNA interactions for Protein: P50607

TUB, Tubby protein homolog, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBP50607 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
TUBP50607 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC15.65■□□□□ 0.1
TUBP50607 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TUBP50607 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC15.65■□□□□ 0.1
TUBP50607 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TUBP50607 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TUBP50607 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
TUBP50607 LINC01101-201ENST00000622953 1884 ntBASIC15.65■□□□□ 0.1
TUBP50607 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TUBP50607 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
TUBP50607 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TUBP50607 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
TUBP50607 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TUBP50607 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC15.65■□□□□ 0.1
TUBP50607 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TUBP50607 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TUBP50607 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TUBP50607 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
TUBP50607 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TUBP50607 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
TUBP50607 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TUBP50607 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TUBP50607 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TUBP50607 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TUBP50607 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
TUBP50607 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
TUBP50607 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
TUBP50607 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TUBP50607 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TUBP50607 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
TUBP50607 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
TUBP50607 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TUBP50607 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TUBP50607 POM121L10P-201ENST00000436994 1285 ntBASIC15.64■□□□□ 0.09
TUBP50607 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC15.64■□□□□ 0.09
TUBP50607 HIST2H2BB-201ENST00000449108 381 ntBASIC15.64■□□□□ 0.09
TUBP50607 AC022494.1-201ENST00000466044 728 ntBASIC15.64■□□□□ 0.09
TUBP50607 ATP6V0CP2-201ENST00000469409 207 ntBASIC15.64■□□□□ 0.09
TUBP50607 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC15.64■□□□□ 0.09
TUBP50607 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC15.64■□□□□ 0.09
TUBP50607 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC15.64■□□□□ 0.09
TUBP50607 KLK11-210ENST00000600362 759 ntTSL 3 BASIC15.64■□□□□ 0.09
TUBP50607 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC15.64■□□□□ 0.09
TUBP50607 DIO1-215ENST00000610607 796 ntTSL 5 BASIC15.64■□□□□ 0.09
TUBP50607 AL096828.3-201ENST00000615354 462 ntBASIC15.64■□□□□ 0.09
TUBP50607 AL008638.5-201ENST00000623814 1298 ntBASIC15.64■□□□□ 0.09
TUBP50607 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC15.64■□□□□ 0.09
TUBP50607 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC15.64■□□□□ 0.09
TUBP50607 ABBA01031663.1-201ENST00000635630 790 ntBASIC15.64■□□□□ 0.09
TUBP50607 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
TUBP50607 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TUBP50607 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC15.64■□□□□ 0.09
TUBP50607 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TUBP50607 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TUBP50607 AL138725.1-201ENST00000407347 1314 ntBASIC15.64■□□□□ 0.09
TUBP50607 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TUBP50607 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC15.64■□□□□ 0.09
TUBP50607 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TUBP50607 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC15.64■□□□□ 0.09
TUBP50607 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC15.64■□□□□ 0.09
TUBP50607 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TUBP50607 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC15.63■□□□□ 0.09
TUBP50607 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC15.63■□□□□ 0.09
TUBP50607 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC15.63■□□□□ 0.09
TUBP50607 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TUBP50607 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC15.63■□□□□ 0.09
TUBP50607 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
TUBP50607 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
TUBP50607 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TUBP50607 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
TUBP50607 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TUBP50607 AC004898.1-201ENST00000451057 766 ntBASIC15.63■□□□□ 0.09
TUBP50607 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TUBP50607 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC15.63■□□□□ 0.09
TUBP50607 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TUBP50607 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC15.63■□□□□ 0.09
TUBP50607 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC15.63■□□□□ 0.09
TUBP50607 AC104982.3-201ENST00000581995 514 ntBASIC15.63■□□□□ 0.09
TUBP50607 AL022328.3-201ENST00000607943 679 ntBASIC15.63■□□□□ 0.09
TUBP50607 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC15.63■□□□□ 0.09
TUBP50607 MIR6787-201ENST00000616675 61 ntBASIC15.63■□□□□ 0.09
TUBP50607 AL359183.1-201ENST00000623796 2132 ntBASIC15.63■□□□□ 0.09
TUBP50607 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TUBP50607 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TUBP50607 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TUBP50607 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC15.63■□□□□ 0.09
TUBP50607 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC15.63■□□□□ 0.09
TUBP50607 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC15.63■□□□□ 0.09
TUBP50607 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC15.63■□□□□ 0.09
TUBP50607 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
TUBP50607 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
TUBP50607 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
TUBP50607 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC15.63■□□□□ 0.09
TUBP50607 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TUBP50607 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TUBP50607 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
TUBP50607 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
TUBP50607 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC15.62■□□□□ 0.09
TUBP50607 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC15.62■□□□□ 0.09
TUBP50607 C1R-201ENST00000535233 2211 ntTSL 2 BASIC15.62■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 87.8 ms