Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLK1P49759 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
CLK1P49759 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC14.04□□□□□ -0.16
CLK1P49759 SMARCA5-201ENST00000283131 7923 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLK1P49759 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CLK1P49759 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CLK1P49759 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CLK1P49759 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC14.04□□□□□ -0.16
CLK1P49759 SGSM1-206ENST00000610372 5991 ntTSL 5 BASIC14.04□□□□□ -0.16
CLK1P49759 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLK1P49759 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLK1P49759 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLK1P49759 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLK1P49759 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLK1P49759 GSE1-202ENST00000393243 7140 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLK1P49759 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLK1P49759 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLK1P49759 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLK1P49759 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CLK1P49759 SUN1-204ENST00000403868 978 ntTSL 2 BASIC14.04□□□□□ -0.16
CLK1P49759 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC14.04□□□□□ -0.16
CLK1P49759 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC14.04□□□□□ -0.16
CLK1P49759 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CLK1P49759 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC14.04□□□□□ -0.16
CLK1P49759 TSPY16P-201ENST00000449843 468 ntBASIC14.04□□□□□ -0.16
CLK1P49759 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CLK1P49759 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC14.04□□□□□ -0.16
CLK1P49759 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CLK1P49759 TPRX2P-201ENST00000535362 881 ntBASIC14.04□□□□□ -0.16
CLK1P49759 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC14.04□□□□□ -0.16
CLK1P49759 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC14.04□□□□□ -0.16
CLK1P49759 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CLK1P49759 AC104794.3-201ENST00000566840 1248 ntBASIC14.04□□□□□ -0.16
CLK1P49759 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC14.04□□□□□ -0.16
CLK1P49759 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC14.04□□□□□ -0.16
CLK1P49759 AC036164.1-201ENST00000570544 333 ntBASIC14.04□□□□□ -0.16
CLK1P49759 AL391069.4-201ENST00000609583 481 ntBASIC14.04□□□□□ -0.16
CLK1P49759 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC14.04□□□□□ -0.16
CLK1P49759 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC14.04□□□□□ -0.16
CLK1P49759 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CLK1P49759 HFE2-206ENST00000634927 506 ntTSL 4 BASIC14.04□□□□□ -0.16
CLK1P49759 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC14.04□□□□□ -0.16
CLK1P49759 MFF-204ENST00000353339 2186 ntTSL 5 BASIC14.04□□□□□ -0.16
CLK1P49759 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CLK1P49759 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC14.04□□□□□ -0.16
CLK1P49759 RERG-209ENST00000546331 1383 ntTSL 2 BASIC14.04□□□□□ -0.16
CLK1P49759 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CLK1P49759 OCRL-201ENST00000357121 5138 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CLK1P49759 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLK1P49759 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC14.04□□□□□ -0.16
CLK1P49759 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC14.04□□□□□ -0.16
CLK1P49759 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC14.04□□□□□ -0.16
CLK1P49759 GALC-206ENST00000544807 2528 ntTSL 2 BASIC14.04□□□□□ -0.16
CLK1P49759 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CLK1P49759 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC14.04□□□□□ -0.16
CLK1P49759 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC14.04□□□□□ -0.16
CLK1P49759 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
CLK1P49759 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CLK1P49759 COLGALT1-201ENST00000252599 3704 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLK1P49759 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
CLK1P49759 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
CLK1P49759 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC14.04□□□□□ -0.16
CLK1P49759 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CLK1P49759 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC14.03□□□□□ -0.16
CLK1P49759 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
CLK1P49759 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
CLK1P49759 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
CLK1P49759 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
CLK1P49759 SLC9A7P1-202ENST00000556476 2239 ntBASIC14.03□□□□□ -0.16
CLK1P49759 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC14.03□□□□□ -0.16
CLK1P49759 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
CLK1P49759 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLK1P49759 ITPR2-202ENST00000381340 11405 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLK1P49759 DUOX2-205ENST00000603300 6345 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLK1P49759 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLK1P49759 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLK1P49759 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
CLK1P49759 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLK1P49759 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
CLK1P49759 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLK1P49759 DENND3-221ENST00000523308 2959 ntTSL 2 BASIC14.03□□□□□ -0.16
CLK1P49759 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLK1P49759 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
CLK1P49759 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
CLK1P49759 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLK1P49759 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLK1P49759 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CLK1P49759 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLK1P49759 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC14.03□□□□□ -0.16
CLK1P49759 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC14.03□□□□□ -0.16
CLK1P49759 BCRP1-201ENST00000444246 691 ntBASIC14.03□□□□□ -0.16
CLK1P49759 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC14.03□□□□□ -0.16
CLK1P49759 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
CLK1P49759 AL158212.4-201ENST00000624062 1286 ntBASIC14.03□□□□□ -0.16
CLK1P49759 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC14.03□□□□□ -0.16
CLK1P49759 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
CLK1P49759 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CLK1P49759 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC14.03□□□□□ -0.16
CLK1P49759 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLK1P49759 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 108.9 ms