Protein–RNA interactions for Protein: P40925

MDH1, Malate dehydrogenase, cytoplasmic, humanhuman

Known RBP Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1P40925 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
MDH1P40925 C1S-202ENST00000360817 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
MDH1P40925 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
MDH1P40925 KRT8P12-202ENST00000472924 1397 ntBASIC14.9□□□□□ -0.02
MDH1P40925 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
MDH1P40925 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
MDH1P40925 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
MDH1P40925 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
MDH1P40925 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC14.9□□□□□ -0.02
MDH1P40925 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC14.9□□□□□ -0.02
MDH1P40925 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC14.9□□□□□ -0.02
MDH1P40925 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC14.9□□□□□ -0.02
MDH1P40925 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
MDH1P40925 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC14.9□□□□□ -0.02
MDH1P40925 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC14.9□□□□□ -0.02
MDH1P40925 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
MDH1P40925 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC14.9□□□□□ -0.02
MDH1P40925 AF228730.6-201ENST00000641497 218 ntBASIC14.9□□□□□ -0.02
MDH1P40925 AC084121.3-201ENST00000641716 218 ntBASIC14.9□□□□□ -0.02
MDH1P40925 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
MDH1P40925 PLD1-201ENST00000331659 2906 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
MDH1P40925 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
MDH1P40925 ZYG11A-201ENST00000371528 4469 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
MDH1P40925 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
MDH1P40925 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC14.9□□□□□ -0.02
MDH1P40925 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
MDH1P40925 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
MDH1P40925 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
MDH1P40925 MEX3B-202ENST00000558133 4333 ntBASIC14.9□□□□□ -0.02
MDH1P40925 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC14.9□□□□□ -0.02
MDH1P40925 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC14.9□□□□□ -0.02
MDH1P40925 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
MDH1P40925 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
MDH1P40925 SLC26A6-202ENST00000337000 2317 ntTSL 2 BASIC14.89□□□□□ -0.03
MDH1P40925 TRHDE-AS1-201ENST00000426250 3684 ntTSL 5 BASIC14.89□□□□□ -0.03
MDH1P40925 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
MDH1P40925 EGFR-207ENST00000455089 3844 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
MDH1P40925 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
MDH1P40925 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC14.89□□□□□ -0.03
MDH1P40925 RAB37-205ENST00000392614 2704 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
MDH1P40925 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
MDH1P40925 KAZN-205ENST00000400798 3643 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
MDH1P40925 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
MDH1P40925 C17orf53-203ENST00000585683 2529 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
MDH1P40925 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
MDH1P40925 TRIT1-202ENST00000372818 2034 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
MDH1P40925 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
MDH1P40925 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
MDH1P40925 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC14.89□□□□□ -0.03
MDH1P40925 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
MDH1P40925 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
MDH1P40925 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC14.89□□□□□ -0.03
MDH1P40925 MLPH-201ENST00000264605 3823 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
MDH1P40925 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
MDH1P40925 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
MDH1P40925 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
MDH1P40925 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
MDH1P40925 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
MDH1P40925 AL353705.2-201ENST00000428243 662 ntBASIC14.89□□□□□ -0.03
MDH1P40925 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC14.89□□□□□ -0.03
MDH1P40925 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC14.89□□□□□ -0.03
MDH1P40925 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC14.89□□□□□ -0.03
MDH1P40925 RN7SL589P-201ENST00000481268 310 ntBASIC14.89□□□□□ -0.03
MDH1P40925 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC14.89□□□□□ -0.03
MDH1P40925 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC14.89□□□□□ -0.03
MDH1P40925 KRT8P23-201ENST00000560090 1207 ntBASIC14.89□□□□□ -0.03
MDH1P40925 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC14.89□□□□□ -0.03
MDH1P40925 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC14.89□□□□□ -0.03
MDH1P40925 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
MDH1P40925 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC14.89□□□□□ -0.03
MDH1P40925 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
MDH1P40925 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
MDH1P40925 MIR7706-201ENST00000613747 67 ntBASIC14.89□□□□□ -0.03
MDH1P40925 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
MDH1P40925 PEG10-205ENST00000612748 2585 ntAPPRIS P5 TSL 5 BASIC14.89□□□□□ -0.03
MDH1P40925 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
MDH1P40925 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
MDH1P40925 F2-205ENST00000530231 1849 ntTSL 5 BASIC14.89□□□□□ -0.03
MDH1P40925 CADM1-204ENST00000536727 3520 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
MDH1P40925 INSC-207ENST00000528567 2237 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
MDH1P40925 RAB37-204ENST00000392613 2617 ntAPPRIS ALT1 TSL 2 BASIC14.89□□□□□ -0.03
MDH1P40925 CARS-214ENST00000529772 2637 ntTSL 2 BASIC14.89□□□□□ -0.03
MDH1P40925 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
MDH1P40925 NISCH-212ENST00000488380 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
MDH1P40925 USH1G-202ENST00000614341 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
MDH1P40925 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
MDH1P40925 KLHL13-209ENST00000545703 3322 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
MDH1P40925 SGMS1-202ENST00000361781 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
MDH1P40925 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
MDH1P40925 CACNA1C-231ENST00000616390 2833 ntTSL 2 BASIC14.88□□□□□ -0.03
MDH1P40925 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
MDH1P40925 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
MDH1P40925 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
MDH1P40925 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC14.88□□□□□ -0.03
MDH1P40925 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
MDH1P40925 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
MDH1P40925 GPA33-201ENST00000367868 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
MDH1P40925 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
MDH1P40925 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
MDH1P40925 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 313.6 ms