Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 HNRNPA1P25-201ENST00000422644 937 ntBASIC20.25■□□□□ 0.83
CPS1P31327 RN7SL173P-201ENST00000461853 292 ntBASIC20.25■□□□□ 0.83
CPS1P31327 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
CPS1P31327 BID-209ENST00000551952 700 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CPS1P31327 DLK1-205ENST00000556051 469 ntTSL 2 BASIC20.25■□□□□ 0.83
CPS1P31327 EEF1DP7-201ENST00000580496 513 ntBASIC20.25■□□□□ 0.83
CPS1P31327 GAS7-216ENST00000583882 553 ntTSL 5 BASIC20.25■□□□□ 0.83
CPS1P31327 KXD1-211ENST00000599319 707 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
CPS1P31327 LINC01588-216ENST00000623502 975 ntTSL 2 BASIC20.25■□□□□ 0.83
CPS1P31327 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
CPS1P31327 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CPS1P31327 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
CPS1P31327 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC20.25■□□□□ 0.83
CPS1P31327 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC20.25■□□□□ 0.83
CPS1P31327 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC20.25■□□□□ 0.83
CPS1P31327 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
CPS1P31327 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CPS1P31327 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC20.24■□□□□ 0.83
CPS1P31327 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CPS1P31327 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
CPS1P31327 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CPS1P31327 AC020931.1-201ENST00000589622 1346 ntBASIC20.24■□□□□ 0.83
CPS1P31327 CSHL1-201ENST00000259003 739 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CPS1P31327 ATXN3-201ENST00000340660 1205 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CPS1P31327 CD300LG-203ENST00000377203 1060 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
CPS1P31327 CASP2-203ENST00000392925 616 ntTSL 3 BASIC20.24■□□□□ 0.83
CPS1P31327 CSHL1-206ENST00000450719 973 ntTSL 2 BASIC20.24■□□□□ 0.83
CPS1P31327 AC026412.1-206ENST00000502273 206 ntBASIC20.24■□□□□ 0.83
CPS1P31327 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC20.24■□□□□ 0.83
CPS1P31327 LAMTOR1-208ENST00000545249 965 ntTSL 3 BASIC20.24■□□□□ 0.83
CPS1P31327 AL591424.3-201ENST00000614278 872 ntBASIC20.24■□□□□ 0.83
CPS1P31327 PDCD6-213ENST00000618970 931 ntTSL 3 BASIC20.24■□□□□ 0.83
CPS1P31327 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CPS1P31327 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CPS1P31327 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC20.24■□□□□ 0.83
CPS1P31327 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CPS1P31327 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC20.24■□□□□ 0.83
CPS1P31327 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CPS1P31327 ETNPPL-206ENST00000510706 1692 ntTSL 2 BASIC20.24■□□□□ 0.83
CPS1P31327 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
CPS1P31327 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CPS1P31327 SF1-209ENST00000433274 2317 ntTSL 2 BASIC20.24■□□□□ 0.83
CPS1P31327 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC20.24■□□□□ 0.83
CPS1P31327 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CPS1P31327 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CPS1P31327 AGGF1P1-201ENST00000509500 2073 ntBASIC20.24■□□□□ 0.83
CPS1P31327 HTR3D-201ENST00000334128 1459 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CPS1P31327 CHRNA1-205ENST00000409542 1460 ntTSL 3 BASIC20.24■□□□□ 0.83
CPS1P31327 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CPS1P31327 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC20.24■□□□□ 0.83
CPS1P31327 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CPS1P31327 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
CPS1P31327 C22orf42-201ENST00000382097 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CPS1P31327 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CPS1P31327 CELP-203ENST00000624767 2414 ntTSL 5 BASIC20.23■□□□□ 0.83
CPS1P31327 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CPS1P31327 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CPS1P31327 PCK2-208ENST00000559250 1804 ntTSL 5 BASIC20.23■□□□□ 0.83
CPS1P31327 AC022080.1-201ENST00000366255 781 ntBASIC20.23■□□□□ 0.83
CPS1P31327 SKOR2-201ENST00000400404 891 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
CPS1P31327 RANGRF-202ENST00000407006 1074 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CPS1P31327 HNRNPA1P2-207ENST00000432375 960 ntBASIC20.23■□□□□ 0.83
CPS1P31327 AL162377.1-202ENST00000456688 1181 ntTSL 2 BASIC20.23■□□□□ 0.83
CPS1P31327 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC20.23■□□□□ 0.83
CPS1P31327 CTB-178M22.2-201ENST00000519795 503 ntTSL 4 BASIC20.23■□□□□ 0.83
CPS1P31327 C11orf45-202ENST00000524878 609 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CPS1P31327 ANKRD26P1-203ENST00000569528 966 ntBASIC20.23■□□□□ 0.83
CPS1P31327 MIR6893-201ENST00000613458 69 ntBASIC20.23■□□□□ 0.83
CPS1P31327 OAZ3-207ENST00000627780 850 ntTSL 5 BASIC20.23■□□□□ 0.83
CPS1P31327 OAZ3-209ENST00000635322 745 ntTSL 5 BASIC20.23■□□□□ 0.83
CPS1P31327 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CPS1P31327 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC20.23■□□□□ 0.83
CPS1P31327 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC20.23■□□□□ 0.83
CPS1P31327 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
CPS1P31327 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
CPS1P31327 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC20.23■□□□□ 0.83
CPS1P31327 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC20.23■□□□□ 0.83
CPS1P31327 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
CPS1P31327 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC20.23■□□□□ 0.83
CPS1P31327 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CPS1P31327 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CPS1P31327 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CPS1P31327 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
CPS1P31327 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
CPS1P31327 AL132657.1-201ENST00000432530 712 ntTSL 3 BASIC20.22■□□□□ 0.83
CPS1P31327 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC20.22■□□□□ 0.83
CPS1P31327 AC099548.2-201ENST00000491047 571 ntTSL 4 BASIC20.22■□□□□ 0.83
CPS1P31327 AAMDC-207ENST00000527134 693 ntTSL 3 BASIC20.22■□□□□ 0.83
CPS1P31327 AP005264.5-201ENST00000590066 467 ntBASIC20.22■□□□□ 0.83
CPS1P31327 AL591471.1-201ENST00000621855 229 ntBASIC20.22■□□□□ 0.83
CPS1P31327 AC005274.1-201ENST00000623460 802 ntBASIC20.22■□□□□ 0.83
CPS1P31327 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC20.22■□□□□ 0.83
CPS1P31327 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CPS1P31327 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC20.22■□□□□ 0.83
CPS1P31327 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
CPS1P31327 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
CPS1P31327 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC20.22■□□□□ 0.83
CPS1P31327 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CPS1P31327 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CPS1P31327 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms