Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC13.22□□□□□ -0.29
HOXC12P31275 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HOXC12P31275 AL662890.1-201ENST00000396818 632 ntBASIC13.22□□□□□ -0.29
HOXC12P31275 AC007969.1-201ENST00000433675 447 ntBASIC13.22□□□□□ -0.29
HOXC12P31275 EIF3FP3-201ENST00000434851 1086 ntBASIC13.22□□□□□ -0.29
HOXC12P31275 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC13.22□□□□□ -0.29
HOXC12P31275 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC13.22□□□□□ -0.29
HOXC12P31275 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
HOXC12P31275 AC091804.1-201ENST00000486888 567 ntBASIC13.22□□□□□ -0.29
HOXC12P31275 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC13.22□□□□□ -0.29
HOXC12P31275 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
HOXC12P31275 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC13.22□□□□□ -0.29
HOXC12P31275 AC078819.1-201ENST00000547454 765 ntBASIC13.22□□□□□ -0.29
HOXC12P31275 AC012085.1-201ENST00000548270 765 ntBASIC13.22□□□□□ -0.29
HOXC12P31275 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC13.22□□□□□ -0.29
HOXC12P31275 HCG18-245ENST00000602550 559 ntTSL 4 BASIC13.22□□□□□ -0.29
HOXC12P31275 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC13.22□□□□□ -0.29
HOXC12P31275 ETV2-208ENST00000621247 941 ntTSL 5 BASIC13.22□□□□□ -0.29
HOXC12P31275 AC006453.4-201ENST00000636949 1252 ntBASIC13.22□□□□□ -0.29
HOXC12P31275 ESPNL-202ENST00000409169 4441 ntTSL 5 BASIC13.22□□□□□ -0.29
HOXC12P31275 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC13.22□□□□□ -0.29
HOXC12P31275 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
HOXC12P31275 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HOXC12P31275 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC13.22□□□□□ -0.29
HOXC12P31275 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HOXC12P31275 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC13.22□□□□□ -0.29
HOXC12P31275 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
HOXC12P31275 AP000845.1-201ENST00000581677 2131 ntBASIC13.22□□□□□ -0.29
HOXC12P31275 UNC13B-202ENST00000378496 5063 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
HOXC12P31275 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
HOXC12P31275 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC13.22□□□□□ -0.29
HOXC12P31275 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
HOXC12P31275 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HOXC12P31275 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC13.22□□□□□ -0.29
HOXC12P31275 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC13.22□□□□□ -0.29
HOXC12P31275 TLL2-201ENST00000357947 6756 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HOXC12P31275 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC13.22□□□□□ -0.29
HOXC12P31275 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
HOXC12P31275 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
HOXC12P31275 ADGRG6-204ENST00000367609 6887 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
HOXC12P31275 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC13.22□□□□□ -0.29
HOXC12P31275 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
HOXC12P31275 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
HOXC12P31275 AC104581.4-201ENST00000623126 3052 ntBASIC13.21□□□□□ -0.29
HOXC12P31275 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC13.21□□□□□ -0.29
HOXC12P31275 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
HOXC12P31275 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
HOXC12P31275 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC13.21□□□□□ -0.29
HOXC12P31275 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
HOXC12P31275 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
HOXC12P31275 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
HOXC12P31275 ANKRD30BP2-201ENST00000435744 1610 ntBASIC13.21□□□□□ -0.29
HOXC12P31275 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC13.21□□□□□ -0.29
HOXC12P31275 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
HOXC12P31275 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
HOXC12P31275 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
HOXC12P31275 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
HOXC12P31275 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
HOXC12P31275 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
HOXC12P31275 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
HOXC12P31275 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
HOXC12P31275 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
HOXC12P31275 GAS6-AS1-201ENST00000458001 7169 ntTSL 5 BASIC13.21□□□□□ -0.29
HOXC12P31275 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC13.21□□□□□ -0.29
HOXC12P31275 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
HOXC12P31275 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC13.21□□□□□ -0.29
HOXC12P31275 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
HOXC12P31275 FAM8A4P-201ENST00000435433 1213 ntBASIC13.21□□□□□ -0.29
HOXC12P31275 AC005077.2-201ENST00000449786 690 ntBASIC13.21□□□□□ -0.29
HOXC12P31275 BX284668.4-201ENST00000453917 508 ntBASIC13.21□□□□□ -0.29
HOXC12P31275 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC13.21□□□□□ -0.29
HOXC12P31275 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC13.21□□□□□ -0.29
HOXC12P31275 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
HOXC12P31275 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC13.21□□□□□ -0.29
HOXC12P31275 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
HOXC12P31275 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
HOXC12P31275 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC13.21□□□□□ -0.29
HOXC12P31275 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
HOXC12P31275 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
HOXC12P31275 KC6-205ENST00000599934 556 ntTSL 4 BASIC13.21□□□□□ -0.29
HOXC12P31275 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC13.21□□□□□ -0.29
HOXC12P31275 SNX1-214ENST00000625244 324 ntTSL 5 BASIC13.21□□□□□ -0.29
HOXC12P31275 SLC44A1-202ENST00000374723 9640 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
HOXC12P31275 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC13.21□□□□□ -0.29
HOXC12P31275 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC13.21□□□□□ -0.29
HOXC12P31275 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
HOXC12P31275 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC13.21□□□□□ -0.29
HOXC12P31275 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
HOXC12P31275 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.29
HOXC12P31275 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
HOXC12P31275 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC13.21□□□□□ -0.3
HOXC12P31275 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
HOXC12P31275 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
HOXC12P31275 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC13.21□□□□□ -0.3
HOXC12P31275 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.3
HOXC12P31275 HARS-202ENST00000415192 1401 ntTSL 2 BASIC13.21□□□□□ -0.3
HOXC12P31275 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC13.21□□□□□ -0.3
HOXC12P31275 ASAP1-201ENST00000357668 6344 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
HOXC12P31275 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
HOXC12P31275 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms