Protein–RNA interactions for Protein: P25800

LMO1, Rhombotin-1, humanhuman

Predictions only

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1P25800 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC12.45□□□□□ -0.42
LMO1P25800 USP4-203ENST00000415188 1454 ntTSL 3 BASIC12.45□□□□□ -0.42
LMO1P25800 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
LMO1P25800 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC12.45□□□□□ -0.42
LMO1P25800 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
LMO1P25800 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC12.45□□□□□ -0.42
LMO1P25800 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
LMO1P25800 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
LMO1P25800 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
LMO1P25800 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
LMO1P25800 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
LMO1P25800 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
LMO1P25800 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
LMO1P25800 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
LMO1P25800 TP73-213ENST00000604479 1623 ntTSL 5 BASIC12.44□□□□□ -0.42
LMO1P25800 AL591122.2-201ENST00000624125 1853 ntBASIC12.44□□□□□ -0.42
LMO1P25800 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC12.44□□□□□ -0.42
LMO1P25800 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
LMO1P25800 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
LMO1P25800 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC12.44□□□□□ -0.42
LMO1P25800 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
LMO1P25800 AC090505.1-201ENST00000430515 1834 ntBASIC12.44□□□□□ -0.42
LMO1P25800 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
LMO1P25800 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC12.44□□□□□ -0.42
LMO1P25800 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
LMO1P25800 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
LMO1P25800 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
LMO1P25800 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
LMO1P25800 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
LMO1P25800 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
LMO1P25800 AC011840.2-201ENST00000563063 1520 ntBASIC12.44□□□□□ -0.42
LMO1P25800 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
LMO1P25800 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
LMO1P25800 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
LMO1P25800 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
LMO1P25800 GUK1-206ENST00000366723 845 ntTSL 5 BASIC12.44□□□□□ -0.42
LMO1P25800 MGST3-203ENST00000367885 680 ntTSL 2 BASIC12.44□□□□□ -0.42
LMO1P25800 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC12.44□□□□□ -0.42
LMO1P25800 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC12.44□□□□□ -0.42
LMO1P25800 GSAP-205ENST00000430584 600 ntTSL 5 BASIC12.44□□□□□ -0.42
LMO1P25800 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC12.44□□□□□ -0.42
LMO1P25800 AL355864.2-201ENST00000447420 863 ntBASIC12.44□□□□□ -0.42
LMO1P25800 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC12.44□□□□□ -0.42
LMO1P25800 RN7SL837P-201ENST00000463010 287 ntBASIC12.44□□□□□ -0.42
LMO1P25800 RN7SL752P-201ENST00000463779 287 ntBASIC12.44□□□□□ -0.42
LMO1P25800 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC12.44□□□□□ -0.42
LMO1P25800 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC12.44□□□□□ -0.42
LMO1P25800 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC12.44□□□□□ -0.42
LMO1P25800 AC103988.2-201ENST00000561804 725 ntBASIC12.44□□□□□ -0.42
LMO1P25800 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC12.44□□□□□ -0.42
LMO1P25800 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC12.44□□□□□ -0.42
LMO1P25800 ETV2-208ENST00000621247 941 ntTSL 5 BASIC12.44□□□□□ -0.42
LMO1P25800 AP001002.3-201ENST00000623482 206 ntBASIC12.44□□□□□ -0.42
LMO1P25800 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC12.44□□□□□ -0.42
LMO1P25800 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
LMO1P25800 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
LMO1P25800 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
LMO1P25800 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
LMO1P25800 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
LMO1P25800 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
LMO1P25800 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
LMO1P25800 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
LMO1P25800 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
LMO1P25800 LSS-211ENST00000522411 2523 ntTSL 2 BASIC12.44□□□□□ -0.42
LMO1P25800 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC12.44□□□□□ -0.42
LMO1P25800 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
LMO1P25800 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
LMO1P25800 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
LMO1P25800 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LMO1P25800 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC12.43□□□□□ -0.42
LMO1P25800 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
LMO1P25800 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LMO1P25800 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
LMO1P25800 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LMO1P25800 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
LMO1P25800 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC12.43□□□□□ -0.42
LMO1P25800 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
LMO1P25800 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LMO1P25800 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LMO1P25800 FKBP4P6-201ENST00000457486 1332 ntBASIC12.43□□□□□ -0.42
LMO1P25800 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
LMO1P25800 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
LMO1P25800 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LMO1P25800 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
LMO1P25800 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
LMO1P25800 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC12.43□□□□□ -0.42
LMO1P25800 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LMO1P25800 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
LMO1P25800 TPM3P8-201ENST00000330554 643 ntBASIC12.43□□□□□ -0.42
LMO1P25800 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
LMO1P25800 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC12.43□□□□□ -0.42
LMO1P25800 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
LMO1P25800 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC12.43□□□□□ -0.42
LMO1P25800 CD8B2-202ENST00000417670 633 ntBASIC12.43□□□□□ -0.42
LMO1P25800 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC12.43□□□□□ -0.42
LMO1P25800 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
LMO1P25800 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC12.43□□□□□ -0.42
LMO1P25800 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
LMO1P25800 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
LMO1P25800 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms