Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
ATF1P18846 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
ATF1P18846 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ATF1P18846 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
ATF1P18846 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ATF1P18846 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC13.06□□□□□ -0.32
ATF1P18846 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
ATF1P18846 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
ATF1P18846 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC13.05□□□□□ -0.32
ATF1P18846 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
ATF1P18846 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
ATF1P18846 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
ATF1P18846 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC13.05□□□□□ -0.32
ATF1P18846 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
ATF1P18846 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
ATF1P18846 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
ATF1P18846 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC13.05□□□□□ -0.32
ATF1P18846 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
ATF1P18846 VMA21-202ENST00000370361 693 ntTSL 5 BASIC13.05□□□□□ -0.32
ATF1P18846 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
ATF1P18846 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC13.05□□□□□ -0.32
ATF1P18846 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
ATF1P18846 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC13.05□□□□□ -0.32
ATF1P18846 HLA-K-203ENST00000430151 1046 ntBASIC13.05□□□□□ -0.32
ATF1P18846 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC13.05□□□□□ -0.32
ATF1P18846 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC13.05□□□□□ -0.32
ATF1P18846 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC13.05□□□□□ -0.32
ATF1P18846 SPDYE18-201ENST00000510091 1050 ntBASIC13.05□□□□□ -0.32
ATF1P18846 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC13.05□□□□□ -0.32
ATF1P18846 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC13.05□□□□□ -0.32
ATF1P18846 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC13.05□□□□□ -0.32
ATF1P18846 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC13.05□□□□□ -0.32
ATF1P18846 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC13.05□□□□□ -0.32
ATF1P18846 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC13.05□□□□□ -0.32
ATF1P18846 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC13.05□□□□□ -0.32
ATF1P18846 DUX4L27-201ENST00000554796 1261 ntBASIC13.05□□□□□ -0.32
ATF1P18846 RARRES2P5-201ENST00000564013 466 ntBASIC13.05□□□□□ -0.32
ATF1P18846 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
ATF1P18846 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
ATF1P18846 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC13.05□□□□□ -0.32
ATF1P18846 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC13.05□□□□□ -0.32
ATF1P18846 AC073548.1-201ENST00000624088 1882 ntBASIC13.05□□□□□ -0.32
ATF1P18846 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
ATF1P18846 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC13.05□□□□□ -0.32
ATF1P18846 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC13.05□□□□□ -0.32
ATF1P18846 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC13.05□□□□□ -0.32
ATF1P18846 AL158070.2-201ENST00000623713 1621 ntBASIC13.05□□□□□ -0.32
ATF1P18846 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC13.05□□□□□ -0.32
ATF1P18846 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
ATF1P18846 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
ATF1P18846 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
ATF1P18846 AC015909.5-201ENST00000624336 2266 ntBASIC13.05□□□□□ -0.32
ATF1P18846 AL138799.1-201ENST00000448213 1675 ntBASIC13.05□□□□□ -0.32
ATF1P18846 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
ATF1P18846 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC13.04□□□□□ -0.32
ATF1P18846 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC13.04□□□□□ -0.32
ATF1P18846 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
ATF1P18846 RN7SL832P-201ENST00000607781 1756 ntBASIC13.04□□□□□ -0.32
ATF1P18846 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
ATF1P18846 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
ATF1P18846 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC13.04□□□□□ -0.32
ATF1P18846 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC13.04□□□□□ -0.32
ATF1P18846 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
ATF1P18846 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
ATF1P18846 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
ATF1P18846 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC13.04□□□□□ -0.32
ATF1P18846 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
ATF1P18846 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC13.04□□□□□ -0.32
ATF1P18846 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
ATF1P18846 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC13.04□□□□□ -0.32
ATF1P18846 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC13.04□□□□□ -0.32
ATF1P18846 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC13.04□□□□□ -0.32
ATF1P18846 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
ATF1P18846 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
ATF1P18846 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC13.04□□□□□ -0.32
ATF1P18846 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
ATF1P18846 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC13.04□□□□□ -0.32
ATF1P18846 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC13.04□□□□□ -0.32
ATF1P18846 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
ATF1P18846 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
ATF1P18846 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
ATF1P18846 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
ATF1P18846 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
ATF1P18846 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
ATF1P18846 MPV17-208ENST00000405076 603 ntTSL 5 BASIC13.04□□□□□ -0.32
ATF1P18846 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC13.04□□□□□ -0.32
ATF1P18846 RASL12-203ENST00000434605 982 ntTSL 2 BASIC13.04□□□□□ -0.32
ATF1P18846 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC13.04□□□□□ -0.32
ATF1P18846 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC13.04□□□□□ -0.32
ATF1P18846 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC13.04□□□□□ -0.32
ATF1P18846 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
ATF1P18846 AC026410.3-201ENST00000514280 936 ntBASIC13.04□□□□□ -0.32
ATF1P18846 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC13.04□□□□□ -0.32
ATF1P18846 STOM-203ENST00000538954 1257 ntTSL 5 BASIC13.04□□□□□ -0.32
ATF1P18846 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC13.04□□□□□ -0.32
ATF1P18846 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC13.04□□□□□ -0.32
ATF1P18846 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC13.04□□□□□ -0.32
ATF1P18846 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC13.04□□□□□ -0.32
ATF1P18846 AC107373.2-201ENST00000607735 490 ntBASIC13.04□□□□□ -0.32
ATF1P18846 AC008738.7-201ENST00000609744 511 ntBASIC13.04□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms