Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RARAP10276 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC15.56■□□□□ 0.08
RARAP10276 AC106760.1-201ENST00000508690 800 ntBASIC15.56■□□□□ 0.08
RARAP10276 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
RARAP10276 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC15.56■□□□□ 0.08
RARAP10276 NEU3-203ENST00000529024 581 ntTSL 3 BASIC15.56■□□□□ 0.08
RARAP10276 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC15.56■□□□□ 0.08
RARAP10276 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC15.56■□□□□ 0.08
RARAP10276 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RARAP10276 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
RARAP10276 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC15.56■□□□□ 0.08
RARAP10276 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RARAP10276 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC15.56■□□□□ 0.08
RARAP10276 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
RARAP10276 AL138725.1-201ENST00000407347 1314 ntBASIC15.56■□□□□ 0.08
RARAP10276 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC15.56■□□□□ 0.08
RARAP10276 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC15.56■□□□□ 0.08
RARAP10276 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RARAP10276 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RARAP10276 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC15.56■□□□□ 0.08
RARAP10276 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RARAP10276 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC15.56■□□□□ 0.08
RARAP10276 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
RARAP10276 DGCR9-201ENST00000609630 2415 ntBASIC15.56■□□□□ 0.08
RARAP10276 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC15.56■□□□□ 0.08
RARAP10276 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
RARAP10276 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RARAP10276 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
RARAP10276 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
RARAP10276 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RARAP10276 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC15.55■□□□□ 0.08
RARAP10276 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC15.55■□□□□ 0.08
RARAP10276 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RARAP10276 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RARAP10276 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
RARAP10276 CICP8-201ENST00000455800 2813 ntBASIC15.55■□□□□ 0.08
RARAP10276 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
RARAP10276 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
RARAP10276 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
RARAP10276 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
RARAP10276 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RARAP10276 GOLGA8VP-201ENST00000559009 1798 ntBASIC15.55■□□□□ 0.08
RARAP10276 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
RARAP10276 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
RARAP10276 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC15.55■□□□□ 0.08
RARAP10276 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
RARAP10276 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
RARAP10276 CLUHP2-201ENST00000426660 1303 ntBASIC15.55■□□□□ 0.08
RARAP10276 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
RARAP10276 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RARAP10276 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC15.55■□□□□ 0.08
RARAP10276 RN7SKP230-201ENST00000365642 335 ntBASIC15.55■□□□□ 0.08
RARAP10276 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RARAP10276 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RARAP10276 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
RARAP10276 AC245100.3-201ENST00000441281 285 ntBASIC15.55■□□□□ 0.08
RARAP10276 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
RARAP10276 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC15.55■□□□□ 0.08
RARAP10276 AP001889.1-201ENST00000525414 633 ntBASIC15.55■□□□□ 0.08
RARAP10276 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC15.55■□□□□ 0.08
RARAP10276 POLE2-203ENST00000553805 496 ntTSL 2 BASIC15.55■□□□□ 0.08
RARAP10276 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RARAP10276 AC027307.3-201ENST00000594262 1100 ntBASIC15.55■□□□□ 0.08
RARAP10276 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RARAP10276 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RARAP10276 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RARAP10276 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RARAP10276 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC15.55■□□□□ 0.08
RARAP10276 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RARAP10276 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
RARAP10276 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
RARAP10276 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
RARAP10276 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
RARAP10276 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
RARAP10276 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RARAP10276 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
RARAP10276 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC15.55■□□□□ 0.08
RARAP10276 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC15.55■□□□□ 0.08
RARAP10276 INE2-201ENST00000630399 1874 ntBASIC15.54■□□□□ 0.08
RARAP10276 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
RARAP10276 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC15.54■□□□□ 0.08
RARAP10276 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RARAP10276 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
RARAP10276 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RARAP10276 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
RARAP10276 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RARAP10276 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
RARAP10276 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC15.54■□□□□ 0.08
RARAP10276 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
RARAP10276 FOS-202ENST00000535987 1402 ntTSL 2 BASIC15.54■□□□□ 0.08
RARAP10276 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
RARAP10276 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC15.54■□□□□ 0.08
RARAP10276 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC15.54■□□□□ 0.08
RARAP10276 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
RARAP10276 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RARAP10276 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
RARAP10276 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
RARAP10276 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RARAP10276 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC15.54■□□□□ 0.08
RARAP10276 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 64.2 ms