Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
CD74P04233 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC12.48□□□□□ -0.41
CD74P04233 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC12.48□□□□□ -0.41
CD74P04233 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
CD74P04233 AL512361.1-201ENST00000554200 418 ntBASIC12.48□□□□□ -0.41
CD74P04233 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC12.48□□□□□ -0.41
CD74P04233 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC12.48□□□□□ -0.41
CD74P04233 AC040169.1-201ENST00000565382 521 ntBASIC12.48□□□□□ -0.41
CD74P04233 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC12.48□□□□□ -0.41
CD74P04233 PIN1-206ENST00000587625 878 ntTSL 2 BASIC12.48□□□□□ -0.41
CD74P04233 GPER1-207ENST00000619052 571 ntTSL 2 BASIC12.48□□□□□ -0.41
CD74P04233 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CD74P04233 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC12.48□□□□□ -0.41
CD74P04233 AC138969.2-201ENST00000532739 9932 ntBASIC12.48□□□□□ -0.41
CD74P04233 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
CD74P04233 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CD74P04233 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
CD74P04233 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
CD74P04233 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CD74P04233 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC12.48□□□□□ -0.41
CD74P04233 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CD74P04233 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CD74P04233 SALL4P5-201ENST00000419001 1760 ntBASIC12.48□□□□□ -0.41
CD74P04233 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CD74P04233 RPL15-213ENST00000611050 2363 ntAPPRIS P1 TSL 4 BASIC12.48□□□□□ -0.41
CD74P04233 NIN-202ENST00000324330 4364 ntTSL 5 BASIC12.48□□□□□ -0.41
CD74P04233 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
CD74P04233 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC12.48□□□□□ -0.41
CD74P04233 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CD74P04233 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
CD74P04233 AC015688.4-201ENST00000580780 1647 ntBASIC12.48□□□□□ -0.41
CD74P04233 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC12.47□□□□□ -0.41
CD74P04233 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC12.47□□□□□ -0.41
CD74P04233 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC12.47□□□□□ -0.41
CD74P04233 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
CD74P04233 AC135782.3-201ENST00000562782 2105 ntBASIC12.47□□□□□ -0.41
CD74P04233 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
CD74P04233 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
CD74P04233 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CD74P04233 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CD74P04233 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC12.47□□□□□ -0.41
CD74P04233 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC12.47□□□□□ -0.41
CD74P04233 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
CD74P04233 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
CD74P04233 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
CD74P04233 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CD74P04233 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
CD74P04233 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC12.47□□□□□ -0.41
CD74P04233 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC12.47□□□□□ -0.41
CD74P04233 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CD74P04233 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC12.47□□□□□ -0.41
CD74P04233 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CD74P04233 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CD74P04233 MRPL37P1-201ENST00000592451 1337 ntBASIC12.47□□□□□ -0.41
CD74P04233 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
CD74P04233 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CD74P04233 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CD74P04233 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC12.47□□□□□ -0.41
CD74P04233 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC12.47□□□□□ -0.41
CD74P04233 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC12.47□□□□□ -0.41
CD74P04233 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC12.47□□□□□ -0.41
CD74P04233 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CD74P04233 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC12.47□□□□□ -0.41
CD74P04233 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CD74P04233 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
CD74P04233 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
CD74P04233 SDHAP3-202ENST00000515467 728 ntBASIC12.47□□□□□ -0.41
CD74P04233 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
CD74P04233 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC12.47□□□□□ -0.41
CD74P04233 AC093520.2-201ENST00000561830 333 ntBASIC12.47□□□□□ -0.41
CD74P04233 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CD74P04233 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
CD74P04233 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CD74P04233 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CD74P04233 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CD74P04233 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC12.47□□□□□ -0.41
CD74P04233 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
CD74P04233 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CD74P04233 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CD74P04233 MKRN1-201ENST00000255977 3151 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
CD74P04233 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CD74P04233 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC12.47□□□□□ -0.41
CD74P04233 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
CD74P04233 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC12.47□□□□□ -0.41
CD74P04233 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC12.47□□□□□ -0.41
CD74P04233 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CD74P04233 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
CD74P04233 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
CD74P04233 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
CD74P04233 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CD74P04233 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CD74P04233 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CD74P04233 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC12.46□□□□□ -0.41
CD74P04233 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CD74P04233 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
CD74P04233 CYB5D1-203ENST00000571846 1870 ntTSL 5 BASIC12.46□□□□□ -0.41
CD74P04233 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CD74P04233 RXRG-204ENST00000619224 2252 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CD74P04233 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CD74P04233 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms