Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
MT-ND1P03886 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
MT-ND1P03886 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
MT-ND1P03886 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC14.06□□□□□ -0.16
MT-ND1P03886 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
MT-ND1P03886 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
MT-ND1P03886 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC14.05□□□□□ -0.16
MT-ND1P03886 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC14.05□□□□□ -0.16
MT-ND1P03886 DKFZP434A062-201ENST00000573103 5021 ntBASIC14.05□□□□□ -0.16
MT-ND1P03886 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC14.05□□□□□ -0.16
MT-ND1P03886 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC14.05□□□□□ -0.16
MT-ND1P03886 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC14.05□□□□□ -0.16
MT-ND1P03886 AL031595.1-201ENST00000623969 4709 ntBASIC14.05□□□□□ -0.16
MT-ND1P03886 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
MT-ND1P03886 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
MT-ND1P03886 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
MT-ND1P03886 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
MT-ND1P03886 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
MT-ND1P03886 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
MT-ND1P03886 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
MT-ND1P03886 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
MT-ND1P03886 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC14.05□□□□□ -0.16
MT-ND1P03886 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
MT-ND1P03886 WRB-204ENST00000398753 699 ntTSL 3 BASIC14.05□□□□□ -0.16
MT-ND1P03886 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC14.05□□□□□ -0.16
MT-ND1P03886 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC14.05□□□□□ -0.16
MT-ND1P03886 KLF2P3-201ENST00000451977 1087 ntBASIC14.05□□□□□ -0.16
MT-ND1P03886 EGFR-207ENST00000455089 3844 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
MT-ND1P03886 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC14.05□□□□□ -0.16
MT-ND1P03886 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
MT-ND1P03886 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC14.05□□□□□ -0.16
MT-ND1P03886 LY6E-204ENST00000519546 971 ntTSL 2 BASIC14.05□□□□□ -0.16
MT-ND1P03886 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC14.05□□□□□ -0.16
MT-ND1P03886 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
MT-ND1P03886 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC14.05□□□□□ -0.16
MT-ND1P03886 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC14.05□□□□□ -0.16
MT-ND1P03886 AC004449.1-201ENST00000564240 433 ntBASIC14.05□□□□□ -0.16
MT-ND1P03886 AC140878.1-201ENST00000565277 250 ntBASIC14.05□□□□□ -0.16
MT-ND1P03886 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC14.05□□□□□ -0.16
MT-ND1P03886 RAB34-223ENST00000636154 730 ntTSL 2 BASIC14.05□□□□□ -0.16
MT-ND1P03886 AL109936.8-201ENST00000641772 604 ntBASIC14.05□□□□□ -0.16
MT-ND1P03886 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC14.05□□□□□ -0.16
MT-ND1P03886 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
MT-ND1P03886 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
MT-ND1P03886 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
MT-ND1P03886 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
MT-ND1P03886 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC14.05□□□□□ -0.16
MT-ND1P03886 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC14.05□□□□□ -0.16
MT-ND1P03886 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
MT-ND1P03886 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC14.05□□□□□ -0.16
MT-ND1P03886 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
MT-ND1P03886 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
MT-ND1P03886 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
MT-ND1P03886 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
MT-ND1P03886 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
MT-ND1P03886 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
MT-ND1P03886 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
MT-ND1P03886 DSTN-201ENST00000246069 3617 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
MT-ND1P03886 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
MT-ND1P03886 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
MT-ND1P03886 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
MT-ND1P03886 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
MT-ND1P03886 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
MT-ND1P03886 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
MT-ND1P03886 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
MT-ND1P03886 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
MT-ND1P03886 GSN-209ENST00000449733 2702 ntTSL 2 BASIC14.04□□□□□ -0.16
MT-ND1P03886 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC14.04□□□□□ -0.16
MT-ND1P03886 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
MT-ND1P03886 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
MT-ND1P03886 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
MT-ND1P03886 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
MT-ND1P03886 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
MT-ND1P03886 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
MT-ND1P03886 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
MT-ND1P03886 BAD-202ENST00000394531 631 ntTSL 3 BASIC14.04□□□□□ -0.16
MT-ND1P03886 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC14.04□□□□□ -0.16
MT-ND1P03886 HLA-K-203ENST00000430151 1046 ntBASIC14.04□□□□□ -0.16
MT-ND1P03886 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
MT-ND1P03886 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC14.04□□□□□ -0.16
MT-ND1P03886 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC14.04□□□□□ -0.16
MT-ND1P03886 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC14.04□□□□□ -0.16
MT-ND1P03886 AC027369.6-201ENST00000525520 931 ntBASIC14.04□□□□□ -0.16
MT-ND1P03886 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC14.04□□□□□ -0.16
MT-ND1P03886 BAD-207ENST00000544785 525 ntTSL 3 BASIC14.04□□□□□ -0.16
MT-ND1P03886 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC14.04□□□□□ -0.16
MT-ND1P03886 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
MT-ND1P03886 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
MT-ND1P03886 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC14.04□□□□□ -0.16
MT-ND1P03886 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC14.04□□□□□ -0.16
MT-ND1P03886 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
MT-ND1P03886 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC14.04□□□□□ -0.16
MT-ND1P03886 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
MT-ND1P03886 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
MT-ND1P03886 AC087499.5-201ENST00000452760 1342 ntBASIC14.04□□□□□ -0.16
MT-ND1P03886 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
MT-ND1P03886 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
MT-ND1P03886 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
MT-ND1P03886 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
MT-ND1P03886 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms