Protein–RNA interactions for Protein: O95407

TNFRSF6B, Tumor necrosis factor receptor superfamily member 6B, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF6BO95407 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
TNFRSF6BO95407 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
TNFRSF6BO95407 SPCS2P4-201ENST00000436160 681 ntBASIC10.83□□□□□ -0.68
TNFRSF6BO95407 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC10.83□□□□□ -0.68
TNFRSF6BO95407 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC10.83□□□□□ -0.68
TNFRSF6BO95407 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC10.83□□□□□ -0.68
TNFRSF6BO95407 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC10.83□□□□□ -0.68
TNFRSF6BO95407 EMBP1-201ENST00000458200 901 ntBASIC10.83□□□□□ -0.68
TNFRSF6BO95407 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC10.83□□□□□ -0.68
TNFRSF6BO95407 KRT18P43-201ENST00000469825 1281 ntBASIC10.83□□□□□ -0.68
TNFRSF6BO95407 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC10.83□□□□□ -0.68
TNFRSF6BO95407 RNF146-204ENST00000476956 884 ntTSL 2 BASIC10.83□□□□□ -0.68
TNFRSF6BO95407 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC10.83□□□□□ -0.68
TNFRSF6BO95407 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC10.83□□□□□ -0.68
TNFRSF6BO95407 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
TNFRSF6BO95407 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC10.83□□□□□ -0.68
TNFRSF6BO95407 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC10.83□□□□□ -0.68
TNFRSF6BO95407 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
TNFRSF6BO95407 AC243562.1-201ENST00000560672 389 ntBASIC10.83□□□□□ -0.68
TNFRSF6BO95407 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC10.83□□□□□ -0.68
TNFRSF6BO95407 LITAF-211ENST00000572255 516 ntTSL 4 BASIC10.83□□□□□ -0.68
TNFRSF6BO95407 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC10.83□□□□□ -0.68
TNFRSF6BO95407 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC10.83□□□□□ -0.68
TNFRSF6BO95407 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
TNFRSF6BO95407 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC10.83□□□□□ -0.68
TNFRSF6BO95407 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC10.83□□□□□ -0.68
TNFRSF6BO95407 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC10.83□□□□□ -0.68
TNFRSF6BO95407 USP6NL-205ENST00000609104 11377 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
TNFRSF6BO95407 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC10.83□□□□□ -0.68
TNFRSF6BO95407 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
TNFRSF6BO95407 TP73-207ENST00000378290 1831 ntTSL 2 BASIC10.83□□□□□ -0.68
TNFRSF6BO95407 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC10.83□□□□□ -0.68
TNFRSF6BO95407 MYO16-205ENST00000457511 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
TNFRSF6BO95407 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC10.83□□□□□ -0.68
TNFRSF6BO95407 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
TNFRSF6BO95407 AC118758.2-201ENST00000614242 2813 ntBASIC10.83□□□□□ -0.68
TNFRSF6BO95407 IP6K2-210ENST00000431721 2174 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
TNFRSF6BO95407 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
TNFRSF6BO95407 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
TNFRSF6BO95407 IMPDH1P4-201ENST00000445028 1534 ntBASIC10.83□□□□□ -0.68
TNFRSF6BO95407 AC092117.1-201ENST00000621230 3250 ntBASIC10.83□□□□□ -0.68
TNFRSF6BO95407 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
TNFRSF6BO95407 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
TNFRSF6BO95407 TRABD2B-202ENST00000606738 7034 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
TNFRSF6BO95407 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC10.83□□□□□ -0.68
TNFRSF6BO95407 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC10.83□□□□□ -0.68
TNFRSF6BO95407 GTPBP4-202ENST00000360803 5075 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
TNFRSF6BO95407 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC10.83□□□□□ -0.68
TNFRSF6BO95407 MEG3-213ENST00000455531 4867 ntTSL 2 BASIC10.83□□□□□ -0.68
TNFRSF6BO95407 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC10.82□□□□□ -0.68
TNFRSF6BO95407 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
TNFRSF6BO95407 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
TNFRSF6BO95407 PKP1-203ENST00000367324 5384 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
TNFRSF6BO95407 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
TNFRSF6BO95407 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC10.82□□□□□ -0.68
TNFRSF6BO95407 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
TNFRSF6BO95407 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
TNFRSF6BO95407 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
TNFRSF6BO95407 AC092053.3-201ENST00000641308 4975 ntBASIC10.82□□□□□ -0.68
TNFRSF6BO95407 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
TNFRSF6BO95407 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
TNFRSF6BO95407 ZNF286B-205ENST00000545289 5328 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
TNFRSF6BO95407 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
TNFRSF6BO95407 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
TNFRSF6BO95407 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC10.82□□□□□ -0.68
TNFRSF6BO95407 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
TNFRSF6BO95407 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC10.82□□□□□ -0.68
TNFRSF6BO95407 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
TNFRSF6BO95407 NEK4-201ENST00000233027 6057 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
TNFRSF6BO95407 BRPF3-201ENST00000339717 4820 ntTSL 5 BASIC10.82□□□□□ -0.68
TNFRSF6BO95407 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
TNFRSF6BO95407 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
TNFRSF6BO95407 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
TNFRSF6BO95407 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC10.82□□□□□ -0.68
TNFRSF6BO95407 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC10.82□□□□□ -0.68
TNFRSF6BO95407 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
TNFRSF6BO95407 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
TNFRSF6BO95407 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
TNFRSF6BO95407 NEK7-201ENST00000367383 586 ntTSL 2 BASIC10.82□□□□□ -0.68
TNFRSF6BO95407 KRT18P64-201ENST00000434946 1219 ntBASIC10.82□□□□□ -0.68
TNFRSF6BO95407 KRT18P2-201ENST00000447938 1258 ntBASIC10.82□□□□□ -0.68
TNFRSF6BO95407 SPDYE11-202ENST00000450699 704 ntBASIC10.82□□□□□ -0.68
TNFRSF6BO95407 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC10.82□□□□□ -0.68
TNFRSF6BO95407 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC10.82□□□□□ -0.68
TNFRSF6BO95407 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC10.82□□□□□ -0.68
TNFRSF6BO95407 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC10.82□□□□□ -0.68
TNFRSF6BO95407 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC10.82□□□□□ -0.68
TNFRSF6BO95407 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC10.82□□□□□ -0.68
TNFRSF6BO95407 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC10.82□□□□□ -0.68
TNFRSF6BO95407 ZFAND6-220ENST00000561060 891 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
TNFRSF6BO95407 LINC01225-203ENST00000563550 1244 ntBASIC10.82□□□□□ -0.68
TNFRSF6BO95407 IGHV3OR16-6-201ENST00000568775 360 ntBASIC10.82□□□□□ -0.68
TNFRSF6BO95407 SPDYE9P-201ENST00000570642 692 ntBASIC10.82□□□□□ -0.68
TNFRSF6BO95407 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC10.82□□□□□ -0.68
TNFRSF6BO95407 SPDYE10P-202ENST00000612005 668 ntBASIC10.82□□□□□ -0.68
TNFRSF6BO95407 SPDYE8P-202ENST00000612377 668 ntBASIC10.82□□□□□ -0.68
TNFRSF6BO95407 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
TNFRSF6BO95407 PLXNA1-201ENST00000393409 9066 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
TNFRSF6BO95407 KCNMA1-216ENST00000457953 3976 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
TNFRSF6BO95407 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 125.8 ms