Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC12.15□□□□□ -0.46
SSSCA1O60232 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
SSSCA1O60232 AC140113.2-201ENST00000604370 208 ntBASIC12.15□□□□□ -0.46
SSSCA1O60232 LINC01115-203ENST00000606068 577 ntBASIC12.15□□□□□ -0.46
SSSCA1O60232 AC007967.4-201ENST00000614700 386 ntBASIC12.15□□□□□ -0.46
SSSCA1O60232 AC005702.4-201ENST00000618393 416 ntBASIC12.15□□□□□ -0.46
SSSCA1O60232 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
SSSCA1O60232 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC12.15□□□□□ -0.46
SSSCA1O60232 GSE1-203ENST00000405402 4366 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
SSSCA1O60232 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SSSCA1O60232 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
SSSCA1O60232 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
SSSCA1O60232 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC12.15□□□□□ -0.46
SSSCA1O60232 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
SSSCA1O60232 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SSSCA1O60232 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC12.15□□□□□ -0.46
SSSCA1O60232 KCNMA1-216ENST00000457953 3976 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
SSSCA1O60232 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
SSSCA1O60232 RN7SL832P-201ENST00000607781 1756 ntBASIC12.15□□□□□ -0.46
SSSCA1O60232 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC12.15□□□□□ -0.47
SSSCA1O60232 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
SSSCA1O60232 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC12.15□□□□□ -0.47
SSSCA1O60232 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
SSSCA1O60232 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
SSSCA1O60232 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
SSSCA1O60232 AC015909.5-201ENST00000624336 2266 ntBASIC12.14□□□□□ -0.47
SSSCA1O60232 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC12.14□□□□□ -0.47
SSSCA1O60232 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SSSCA1O60232 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SSSCA1O60232 TMEM131L-202ENST00000409663 5017 ntAPPRIS P3 TSL 5 BASIC12.14□□□□□ -0.47
SSSCA1O60232 NTNG1-204ENST00000370067 4628 ntTSL 5 BASIC12.14□□□□□ -0.47
SSSCA1O60232 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SSSCA1O60232 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
SSSCA1O60232 AC092053.3-201ENST00000641308 4975 ntBASIC12.14□□□□□ -0.47
SSSCA1O60232 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SSSCA1O60232 PI4KB-203ENST00000368874 3934 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SSSCA1O60232 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
SSSCA1O60232 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SSSCA1O60232 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC12.14□□□□□ -0.47
SSSCA1O60232 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC12.14□□□□□ -0.47
SSSCA1O60232 CHD5-201ENST00000262450 9646 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SSSCA1O60232 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SSSCA1O60232 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
SSSCA1O60232 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
SSSCA1O60232 AC023274.1-201ENST00000418278 595 ntBASIC12.14□□□□□ -0.47
SSSCA1O60232 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC12.14□□□□□ -0.47
SSSCA1O60232 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC12.14□□□□□ -0.47
SSSCA1O60232 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC12.14□□□□□ -0.47
SSSCA1O60232 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
SSSCA1O60232 AC027601.4-201ENST00000611259 610 ntBASIC12.14□□□□□ -0.47
SSSCA1O60232 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC12.14□□□□□ -0.47
SSSCA1O60232 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC12.14□□□□□ -0.47
SSSCA1O60232 NPHP3-ACAD11-201ENST00000471702 7784 ntTSL 2 BASIC12.14□□□□□ -0.47
SSSCA1O60232 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SSSCA1O60232 ZNF275-201ENST00000370249 5920 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SSSCA1O60232 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SSSCA1O60232 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SSSCA1O60232 CNTLN-201ENST00000380641 4871 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
SSSCA1O60232 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
SSSCA1O60232 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC12.14□□□□□ -0.47
SSSCA1O60232 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
SSSCA1O60232 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC12.14□□□□□ -0.47
SSSCA1O60232 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
SSSCA1O60232 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
SSSCA1O60232 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC12.14□□□□□ -0.47
SSSCA1O60232 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
SSSCA1O60232 LMBRD2-201ENST00000296603 8185 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SSSCA1O60232 MAMDC4-202ENST00000445819 3895 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
SSSCA1O60232 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
SSSCA1O60232 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC12.13□□□□□ -0.47
SSSCA1O60232 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC12.13□□□□□ -0.47
SSSCA1O60232 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
SSSCA1O60232 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC12.13□□□□□ -0.47
SSSCA1O60232 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC12.13□□□□□ -0.47
SSSCA1O60232 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SSSCA1O60232 SGMS1-202ENST00000361781 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SSSCA1O60232 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
SSSCA1O60232 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC12.13□□□□□ -0.47
SSSCA1O60232 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
SSSCA1O60232 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC12.13□□□□□ -0.47
SSSCA1O60232 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC12.13□□□□□ -0.47
SSSCA1O60232 BAG2-201ENST00000370693 6651 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SSSCA1O60232 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC12.13□□□□□ -0.47
SSSCA1O60232 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
SSSCA1O60232 BCL2L11-221ENST00000621302 5224 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
SSSCA1O60232 BCL2L11-222ENST00000622509 5231 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
SSSCA1O60232 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SSSCA1O60232 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
SSSCA1O60232 FLNA-201ENST00000344736 7932 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
SSSCA1O60232 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC12.13□□□□□ -0.47
SSSCA1O60232 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
SSSCA1O60232 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
SSSCA1O60232 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC12.13□□□□□ -0.47
SSSCA1O60232 AL591122.2-201ENST00000624125 1853 ntBASIC12.13□□□□□ -0.47
SSSCA1O60232 CACNA1G-214ENST00000505165 6633 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
SSSCA1O60232 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SSSCA1O60232 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SSSCA1O60232 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
SSSCA1O60232 ACTG1P14-201ENST00000446382 1122 ntBASIC12.13□□□□□ -0.47
SSSCA1O60232 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC12.13□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms