Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 CCL3L3-203ENST00000619989 784 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CHD2O14647 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CHD2O14647 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC19.81■□□□□ 0.76
CHD2O14647 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CHD2O14647 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CHD2O14647 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC19.81■□□□□ 0.76
CHD2O14647 AC079328.2-201ENST00000561241 3354 ntBASIC19.81■□□□□ 0.76
CHD2O14647 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC19.81■□□□□ 0.76
CHD2O14647 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CHD2O14647 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CHD2O14647 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
CHD2O14647 DLEU2-205ENST00000443587 705 ntTSL 5 BASIC19.81■□□□□ 0.76
CHD2O14647 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC19.81■□□□□ 0.76
CHD2O14647 AL451069.3-201ENST00000450206 1013 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CHD2O14647 HNRNPA3P6-201ENST00000472163 1006 ntBASIC19.81■□□□□ 0.76
CHD2O14647 SMUG1-221ENST00000514196 553 ntTSL 4 BASIC19.81■□□□□ 0.76
CHD2O14647 VEGFA-219ENST00000518824 606 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CHD2O14647 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC19.81■□□□□ 0.76
CHD2O14647 AC073569.2-201ENST00000551995 354 ntTSL 5 BASIC19.81■□□□□ 0.76
CHD2O14647 AC142086.5-202ENST00000562500 217 ntBASIC19.81■□□□□ 0.76
CHD2O14647 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC19.81■□□□□ 0.76
CHD2O14647 PRKACA-208ENST00000589994 1127 ntTSL 2 BASIC19.81■□□□□ 0.76
CHD2O14647 AL357143.1-203ENST00000639750 881 ntBASIC19.81■□□□□ 0.76
CHD2O14647 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CHD2O14647 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CHD2O14647 DSG1-202ENST00000462981 1857 ntTSL 2 BASIC19.81■□□□□ 0.76
CHD2O14647 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHD2O14647 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CHD2O14647 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHD2O14647 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
CHD2O14647 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC19.8■□□□□ 0.76
CHD2O14647 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC19.8■□□□□ 0.76
CHD2O14647 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHD2O14647 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CHD2O14647 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CHD2O14647 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC19.8■□□□□ 0.76
CHD2O14647 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CHD2O14647 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
CHD2O14647 IMMT-212ENST00000620815 1520 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CHD2O14647 CFAP36-204ENST00000406691 1575 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CHD2O14647 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
CHD2O14647 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
CHD2O14647 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CHD2O14647 ATP5H-202ENST00000344546 553 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CHD2O14647 AQP7-202ENST00000377425 1068 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CHD2O14647 TMEM14B-201ENST00000379530 787 ntTSL 2 BASIC19.8■□□□□ 0.76
CHD2O14647 ACTBP14-201ENST00000411655 1089 ntBASIC19.8■□□□□ 0.76
CHD2O14647 MED19-202ENST00000431606 1203 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHD2O14647 AC078852.1-201ENST00000515842 441 ntTSL 3 BASIC19.8■□□□□ 0.76
CHD2O14647 OVOL3-201ENST00000585332 695 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
CHD2O14647 ZNF724-202ENST00000597037 780 ntTSL 2 BASIC19.8■□□□□ 0.76
CHD2O14647 AL031673.1-201ENST00000611460 466 ntBASIC19.8■□□□□ 0.76
CHD2O14647 OVOL3-202ENST00000633214 675 ntAPPRIS P2 TSL 5 BASIC19.8■□□□□ 0.76
CHD2O14647 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHD2O14647 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHD2O14647 CERCAM-214ENST00000613052 1429 ntTSL 5 BASIC19.8■□□□□ 0.76
CHD2O14647 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC19.8■□□□□ 0.76
CHD2O14647 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC19.8■□□□□ 0.76
CHD2O14647 MX1-218ENST00000619682 1980 ntTSL 5 BASIC19.8■□□□□ 0.76
CHD2O14647 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CHD2O14647 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CHD2O14647 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CHD2O14647 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CHD2O14647 EPPIN-201ENST00000336443 1217 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CHD2O14647 U3.5-201ENST00000363448 216 ntBASIC19.79■□□□□ 0.76
CHD2O14647 G0S2-201ENST00000367029 866 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CHD2O14647 IFNLR1-203ENST00000374418 674 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CHD2O14647 ATRAID-202ENST00000405489 1059 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CHD2O14647 LINC00303-203ENST00000427799 1028 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CHD2O14647 FDPSP7-201ENST00000429043 1054 ntBASIC19.79■□□□□ 0.76
CHD2O14647 CLDN25-201ENST00000453129 754 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
CHD2O14647 AC025594.1-201ENST00000469533 543 ntBASIC19.79■□□□□ 0.76
CHD2O14647 PHF23-213ENST00000613632 850 ntTSL 5 BASIC19.79■□□□□ 0.76
CHD2O14647 PDCD6-213ENST00000618970 931 ntTSL 3 BASIC19.79■□□□□ 0.76
CHD2O14647 AC245369.7-201ENST00000631386 350 ntBASIC19.79■□□□□ 0.76
CHD2O14647 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CHD2O14647 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC19.79■□□□□ 0.76
CHD2O14647 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CHD2O14647 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
CHD2O14647 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC19.79■□□□□ 0.76
CHD2O14647 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC19.79■□□□□ 0.76
CHD2O14647 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
CHD2O14647 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CHD2O14647 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.79■□□□□ 0.76
CHD2O14647 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
CHD2O14647 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CHD2O14647 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CHD2O14647 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC19.79■□□□□ 0.76
CHD2O14647 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CHD2O14647 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
CHD2O14647 RPL14-203ENST00000416518 812 ntTSL 3 BASIC19.79■□□□□ 0.76
CHD2O14647 HNRNPA1P21-201ENST00000424115 961 ntBASIC19.79■□□□□ 0.76
CHD2O14647 AC103563.1-201ENST00000429316 123 ntBASIC19.79■□□□□ 0.76
CHD2O14647 FAM138B-202ENST00000446648 1130 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CHD2O14647 FAM138C-202ENST00000449442 1126 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CHD2O14647 VDAC1P11-201ENST00000458323 852 ntBASIC19.79■□□□□ 0.76
CHD2O14647 FAM138F-201ENST00000631376 1183 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CHD2O14647 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CHD2O14647 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC19.78■□□□□ 0.76
CHD2O14647 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms