Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
NPIPA3F8WFD2 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NPIPA3F8WFD2 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
NPIPA3F8WFD2 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
NPIPA3F8WFD2 TNRC18P2-201ENST00000417666 2714 ntBASIC13.53□□□□□ -0.24
NPIPA3F8WFD2 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC13.53□□□□□ -0.24
NPIPA3F8WFD2 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
NPIPA3F8WFD2 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
NPIPA3F8WFD2 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
NPIPA3F8WFD2 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
NPIPA3F8WFD2 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
NPIPA3F8WFD2 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC13.53□□□□□ -0.24
NPIPA3F8WFD2 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC13.53□□□□□ -0.24
NPIPA3F8WFD2 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC13.53□□□□□ -0.24
NPIPA3F8WFD2 ATP6V0CP2-201ENST00000469409 207 ntBASIC13.53□□□□□ -0.24
NPIPA3F8WFD2 AC091804.1-201ENST00000486888 567 ntBASIC13.53□□□□□ -0.24
NPIPA3F8WFD2 SCARNA20.5-201ENST00000516991 142 ntBASIC13.53□□□□□ -0.24
NPIPA3F8WFD2 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
NPIPA3F8WFD2 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC13.53□□□□□ -0.24
NPIPA3F8WFD2 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC13.53□□□□□ -0.24
NPIPA3F8WFD2 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC13.53□□□□□ -0.24
NPIPA3F8WFD2 NKG7-204ENST00000595217 816 ntTSL 2 BASIC13.53□□□□□ -0.24
NPIPA3F8WFD2 KC6-205ENST00000599934 556 ntTSL 4 BASIC13.53□□□□□ -0.24
NPIPA3F8WFD2 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC13.53□□□□□ -0.24
NPIPA3F8WFD2 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC13.53□□□□□ -0.24
NPIPA3F8WFD2 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NPIPA3F8WFD2 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC13.53□□□□□ -0.24
NPIPA3F8WFD2 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC13.53□□□□□ -0.24
NPIPA3F8WFD2 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC13.53□□□□□ -0.24
NPIPA3F8WFD2 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
NPIPA3F8WFD2 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
NPIPA3F8WFD2 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
NPIPA3F8WFD2 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC13.53□□□□□ -0.24
NPIPA3F8WFD2 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
NPIPA3F8WFD2 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NPIPA3F8WFD2 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
NPIPA3F8WFD2 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
NPIPA3F8WFD2 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NPIPA3F8WFD2 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NPIPA3F8WFD2 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
NPIPA3F8WFD2 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NPIPA3F8WFD2 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NPIPA3F8WFD2 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC13.53□□□□□ -0.24
NPIPA3F8WFD2 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NPIPA3F8WFD2 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
NPIPA3F8WFD2 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC13.52□□□□□ -0.24
NPIPA3F8WFD2 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
NPIPA3F8WFD2 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC13.52□□□□□ -0.24
NPIPA3F8WFD2 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC13.52□□□□□ -0.24
NPIPA3F8WFD2 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC13.52□□□□□ -0.24
NPIPA3F8WFD2 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
NPIPA3F8WFD2 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
NPIPA3F8WFD2 AJ011931.1-201ENST00000618749 2492 ntBASIC13.52□□□□□ -0.24
NPIPA3F8WFD2 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.24
NPIPA3F8WFD2 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
NPIPA3F8WFD2 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.24
NPIPA3F8WFD2 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
NPIPA3F8WFD2 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.25
NPIPA3F8WFD2 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
NPIPA3F8WFD2 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
NPIPA3F8WFD2 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
NPIPA3F8WFD2 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
NPIPA3F8WFD2 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
NPIPA3F8WFD2 AL136309.1-201ENST00000403917 691 ntBASIC13.52□□□□□ -0.25
NPIPA3F8WFD2 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
NPIPA3F8WFD2 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
NPIPA3F8WFD2 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC13.52□□□□□ -0.25
NPIPA3F8WFD2 AC100850.1-201ENST00000506768 649 ntBASIC13.52□□□□□ -0.25
NPIPA3F8WFD2 AC126915.1-201ENST00000522847 1038 ntBASIC13.52□□□□□ -0.25
NPIPA3F8WFD2 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC13.52□□□□□ -0.25
NPIPA3F8WFD2 ACTG1P17-201ENST00000558391 1119 ntBASIC13.52□□□□□ -0.25
NPIPA3F8WFD2 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC13.52□□□□□ -0.25
NPIPA3F8WFD2 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
NPIPA3F8WFD2 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC13.52□□□□□ -0.25
NPIPA3F8WFD2 AL451050.2-201ENST00000606967 682 ntBASIC13.52□□□□□ -0.25
NPIPA3F8WFD2 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC13.52□□□□□ -0.25
NPIPA3F8WFD2 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
NPIPA3F8WFD2 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC13.52□□□□□ -0.25
NPIPA3F8WFD2 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
NPIPA3F8WFD2 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
NPIPA3F8WFD2 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC13.52□□□□□ -0.25
NPIPA3F8WFD2 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
NPIPA3F8WFD2 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC13.52□□□□□ -0.25
NPIPA3F8WFD2 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
NPIPA3F8WFD2 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC13.52□□□□□ -0.25
NPIPA3F8WFD2 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
NPIPA3F8WFD2 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
NPIPA3F8WFD2 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
NPIPA3F8WFD2 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC13.52□□□□□ -0.25
NPIPA3F8WFD2 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
NPIPA3F8WFD2 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
NPIPA3F8WFD2 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
NPIPA3F8WFD2 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC13.52□□□□□ -0.25
NPIPA3F8WFD2 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
NPIPA3F8WFD2 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
NPIPA3F8WFD2 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
NPIPA3F8WFD2 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
NPIPA3F8WFD2 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
NPIPA3F8WFD2 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NPIPA3F8WFD2 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms