Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 RPL3P5-201ENST00000441645 1232 ntBASIC21.6■■□□□ 1.05
CDC42BPBQ9Y5S2 AC107464.2-201ENST00000502923 569 ntTSL 2 BASIC21.6■■□□□ 1.05
CDC42BPBQ9Y5S2 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC21.6■■□□□ 1.05
CDC42BPBQ9Y5S2 LINC02018-201ENST00000608169 1268 ntTSL 4 BASIC21.6■■□□□ 1.05
CDC42BPBQ9Y5S2 PFDN5-220ENST00000628881 231 ntTSL 3 BASIC21.6■■□□□ 1.05
CDC42BPBQ9Y5S2 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC21.6■■□□□ 1.05
CDC42BPBQ9Y5S2 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CDC42BPBQ9Y5S2 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC21.6■■□□□ 1.05
CDC42BPBQ9Y5S2 AC005906.2-205ENST00000640862 1522 ntTSL 5 BASIC21.6■■□□□ 1.05
CDC42BPBQ9Y5S2 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
CDC42BPBQ9Y5S2 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC21.6■■□□□ 1.05
CDC42BPBQ9Y5S2 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CDC42BPBQ9Y5S2 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CDC42BPBQ9Y5S2 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
CDC42BPBQ9Y5S2 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
CDC42BPBQ9Y5S2 LAMP5-202ENST00000427562 1309 ntTSL 2 BASIC21.6■■□□□ 1.05
CDC42BPBQ9Y5S2 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CDC42BPBQ9Y5S2 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CDC42BPBQ9Y5S2 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC21.6■■□□□ 1.05
CDC42BPBQ9Y5S2 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CDC42BPBQ9Y5S2 TPM3-211ENST00000368531 1115 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CDC42BPBQ9Y5S2 RPRD2-201ENST00000369067 1043 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
CDC42BPBQ9Y5S2 IFNLR1-204ENST00000374419 953 ntTSL 5 BASIC21.6■■□□□ 1.05
CDC42BPBQ9Y5S2 HIST1H4B-201ENST00000377745 438 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
CDC42BPBQ9Y5S2 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC21.6■■□□□ 1.05
CDC42BPBQ9Y5S2 PSAT1P2-201ENST00000426107 972 ntBASIC21.6■■□□□ 1.05
CDC42BPBQ9Y5S2 HNRNPA1P2-207ENST00000432375 960 ntBASIC21.6■■□□□ 1.05
CDC42BPBQ9Y5S2 NME6-208ENST00000435684 599 ntTSL 2 BASIC21.6■■□□□ 1.05
CDC42BPBQ9Y5S2 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC21.6■■□□□ 1.05
CDC42BPBQ9Y5S2 MIR6074-201ENST00000612054 107 ntBASIC21.6■■□□□ 1.05
CDC42BPBQ9Y5S2 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CDC42BPBQ9Y5S2 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CDC42BPBQ9Y5S2 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CDC42BPBQ9Y5S2 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC21.6■■□□□ 1.05
CDC42BPBQ9Y5S2 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC21.59■■□□□ 1.05
CDC42BPBQ9Y5S2 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CDC42BPBQ9Y5S2 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC21.59■■□□□ 1.05
CDC42BPBQ9Y5S2 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CDC42BPBQ9Y5S2 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
CDC42BPBQ9Y5S2 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CDC42BPBQ9Y5S2 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC21.59■■□□□ 1.05
CDC42BPBQ9Y5S2 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CDC42BPBQ9Y5S2 CNBP-205ENST00000500450 1516 ntTSL 2 BASIC21.59■■□□□ 1.05
CDC42BPBQ9Y5S2 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC21.59■■□□□ 1.05
CDC42BPBQ9Y5S2 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CDC42BPBQ9Y5S2 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CDC42BPBQ9Y5S2 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
CDC42BPBQ9Y5S2 UPK1A-201ENST00000222275 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CDC42BPBQ9Y5S2 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CDC42BPBQ9Y5S2 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC21.59■■□□□ 1.05
CDC42BPBQ9Y5S2 UPK1A-202ENST00000379013 1016 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CDC42BPBQ9Y5S2 AL353658.1-201ENST00000436263 789 ntTSL 2 BASIC21.59■■□□□ 1.05
CDC42BPBQ9Y5S2 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC21.59■■□□□ 1.05
CDC42BPBQ9Y5S2 AC010127.1-202ENST00000597623 713 ntTSL 2 BASIC21.59■■□□□ 1.05
CDC42BPBQ9Y5S2 AL359091.4-201ENST00000610052 409 ntBASIC21.59■■□□□ 1.05
CDC42BPBQ9Y5S2 AP000769.1-203ENST00000637245 208 ntBASIC21.59■■□□□ 1.05
CDC42BPBQ9Y5S2 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CDC42BPBQ9Y5S2 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC21.59■■□□□ 1.05
CDC42BPBQ9Y5S2 CCL5-201ENST00000603197 1365 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CDC42BPBQ9Y5S2 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CDC42BPBQ9Y5S2 AC018529.2-202ENST00000611482 3087 ntBASIC21.59■■□□□ 1.05
CDC42BPBQ9Y5S2 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CDC42BPBQ9Y5S2 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC21.59■■□□□ 1.05
CDC42BPBQ9Y5S2 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
CDC42BPBQ9Y5S2 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CDC42BPBQ9Y5S2 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CDC42BPBQ9Y5S2 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC21.58■■□□□ 1.05
CDC42BPBQ9Y5S2 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CDC42BPBQ9Y5S2 IGHV5-51-201ENST00000390626 410 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
CDC42BPBQ9Y5S2 KRT18P4-201ENST00000422599 1288 ntBASIC21.58■■□□□ 1.05
CDC42BPBQ9Y5S2 RN7SL147P-201ENST00000487345 298 ntBASIC21.58■■□□□ 1.05
CDC42BPBQ9Y5S2 AC008026.2-201ENST00000495438 348 ntBASIC21.58■■□□□ 1.05
CDC42BPBQ9Y5S2 GDNF-207ENST00000515058 764 ntTSL 5 BASIC21.58■■□□□ 1.05
CDC42BPBQ9Y5S2 AC111149.2-202ENST00000518355 599 ntTSL 4 BASIC21.58■■□□□ 1.05
CDC42BPBQ9Y5S2 AC087203.1-201ENST00000532111 1181 ntBASIC21.58■■□□□ 1.05
CDC42BPBQ9Y5S2 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC21.58■■□□□ 1.05
CDC42BPBQ9Y5S2 HTR3E-205ENST00000436361 1371 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CDC42BPBQ9Y5S2 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC21.58■■□□□ 1.05
CDC42BPBQ9Y5S2 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CDC42BPBQ9Y5S2 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC21.58■■□□□ 1.05
CDC42BPBQ9Y5S2 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC21.58■■□□□ 1.05
CDC42BPBQ9Y5S2 AC106707.1-201ENST00000475981 1640 ntTSL 2 BASIC21.58■■□□□ 1.05
CDC42BPBQ9Y5S2 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
CDC42BPBQ9Y5S2 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CDC42BPBQ9Y5S2 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CDC42BPBQ9Y5S2 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC21.58■■□□□ 1.04
CDC42BPBQ9Y5S2 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC21.58■■□□□ 1.04
CDC42BPBQ9Y5S2 MRPL33-201ENST00000296102 518 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CDC42BPBQ9Y5S2 MRPL33-202ENST00000379666 404 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
CDC42BPBQ9Y5S2 AL451000.1-201ENST00000451300 1186 ntBASIC21.58■■□□□ 1.04
CDC42BPBQ9Y5S2 IGHEP2-201ENST00000519308 1256 ntBASIC21.58■■□□□ 1.04
CDC42BPBQ9Y5S2 AP003031.2-205ENST00000531263 683 ntTSL 2 BASIC21.58■■□□□ 1.04
CDC42BPBQ9Y5S2 MBP-238ENST00000580402 915 ntTSL 5 BASIC21.58■■□□□ 1.04
CDC42BPBQ9Y5S2 AP005212.2-201ENST00000584979 510 ntBASIC21.58■■□□□ 1.04
CDC42BPBQ9Y5S2 NMRK2-202ENST00000593949 869 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
CDC42BPBQ9Y5S2 NMRK2-204ENST00000599576 691 ntTSL 3 BASIC21.58■■□□□ 1.04
CDC42BPBQ9Y5S2 AL160191.2-201ENST00000603975 601 ntBASIC21.58■■□□□ 1.04
CDC42BPBQ9Y5S2 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
CDC42BPBQ9Y5S2 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CDC42BPBQ9Y5S2 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC21.57■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms