Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC14.7□□□□□ -0.06
SSU72Q9NP77 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
SSU72Q9NP77 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC14.7□□□□□ -0.06
SSU72Q9NP77 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SSU72Q9NP77 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SSU72Q9NP77 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
SSU72Q9NP77 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SSU72Q9NP77 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SSU72Q9NP77 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SSU72Q9NP77 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SSU72Q9NP77 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SSU72Q9NP77 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SSU72Q9NP77 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SSU72Q9NP77 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
SSU72Q9NP77 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SSU72Q9NP77 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC14.7□□□□□ -0.06
SSU72Q9NP77 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SSU72Q9NP77 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC14.7□□□□□ -0.06
SSU72Q9NP77 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SSU72Q9NP77 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SSU72Q9NP77 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
SSU72Q9NP77 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
SSU72Q9NP77 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
SSU72Q9NP77 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SSU72Q9NP77 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SSU72Q9NP77 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC14.69□□□□□ -0.06
SSU72Q9NP77 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC14.69□□□□□ -0.06
SSU72Q9NP77 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SSU72Q9NP77 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
SSU72Q9NP77 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SSU72Q9NP77 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SSU72Q9NP77 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
SSU72Q9NP77 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
SSU72Q9NP77 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SSU72Q9NP77 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SSU72Q9NP77 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SSU72Q9NP77 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SSU72Q9NP77 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC14.69□□□□□ -0.06
SSU72Q9NP77 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
SSU72Q9NP77 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
SSU72Q9NP77 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SSU72Q9NP77 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SSU72Q9NP77 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SSU72Q9NP77 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC14.69□□□□□ -0.06
SSU72Q9NP77 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC14.69□□□□□ -0.06
SSU72Q9NP77 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC14.69□□□□□ -0.06
SSU72Q9NP77 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC14.69□□□□□ -0.06
SSU72Q9NP77 VDAC1P7-201ENST00000462417 847 ntBASIC14.69□□□□□ -0.06
SSU72Q9NP77 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SSU72Q9NP77 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC14.69□□□□□ -0.06
SSU72Q9NP77 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC14.69□□□□□ -0.06
SSU72Q9NP77 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC14.69□□□□□ -0.06
SSU72Q9NP77 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC14.69□□□□□ -0.06
SSU72Q9NP77 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC14.69□□□□□ -0.06
SSU72Q9NP77 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC14.69□□□□□ -0.06
SSU72Q9NP77 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC14.69□□□□□ -0.06
SSU72Q9NP77 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC14.69□□□□□ -0.06
SSU72Q9NP77 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
SSU72Q9NP77 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
SSU72Q9NP77 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SSU72Q9NP77 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SSU72Q9NP77 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SSU72Q9NP77 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
SSU72Q9NP77 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SSU72Q9NP77 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC14.69□□□□□ -0.06
SSU72Q9NP77 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SSU72Q9NP77 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC14.69□□□□□ -0.06
SSU72Q9NP77 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SSU72Q9NP77 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC14.69□□□□□ -0.06
SSU72Q9NP77 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC14.69□□□□□ -0.06
SSU72Q9NP77 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC14.69□□□□□ -0.06
SSU72Q9NP77 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SSU72Q9NP77 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SSU72Q9NP77 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC14.69□□□□□ -0.06
SSU72Q9NP77 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC14.69□□□□□ -0.06
SSU72Q9NP77 AC126335.2-201ENST00000623362 4637 ntBASIC14.69□□□□□ -0.06
SSU72Q9NP77 BRSK2-207ENST00000528710 3528 ntTSL 2 BASIC14.69□□□□□ -0.06
SSU72Q9NP77 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC14.68□□□□□ -0.06
SSU72Q9NP77 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC14.68□□□□□ -0.06
SSU72Q9NP77 AL590440.2-201ENST00000641973 1595 ntBASIC14.68□□□□□ -0.06
SSU72Q9NP77 AC064801.2-201ENST00000625052 1303 ntBASIC14.68□□□□□ -0.06
SSU72Q9NP77 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
SSU72Q9NP77 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SSU72Q9NP77 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SSU72Q9NP77 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SSU72Q9NP77 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
SSU72Q9NP77 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
SSU72Q9NP77 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
SSU72Q9NP77 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC14.68□□□□□ -0.06
SSU72Q9NP77 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
SSU72Q9NP77 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
SSU72Q9NP77 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SSU72Q9NP77 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SSU72Q9NP77 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
SSU72Q9NP77 RNU1-114P-201ENST00000365297 166 ntBASIC14.68□□□□□ -0.06
SSU72Q9NP77 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC14.68□□□□□ -0.06
SSU72Q9NP77 AC069120.2-201ENST00000524091 540 ntBASIC14.68□□□□□ -0.06
SSU72Q9NP77 AC027369.6-201ENST00000525520 931 ntBASIC14.68□□□□□ -0.06
SSU72Q9NP77 FTH1-202ENST00000526640 786 ntTSL 2 BASIC14.68□□□□□ -0.06
SSU72Q9NP77 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC14.68□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 59.3 ms